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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1438580 |
| Transcript ID | Lj4g3v1438580.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: leucine-rich repeat protein soc-2 homolog isoform X1 [Cicer arietinum] gi|502176452|ref|XP_004515868.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 19 | 60 | 42 | – | – | |
| Coils | 157 | 177 | 21 | – | – | |
| SUPERFAMILY | 215 | 445 | 231 | 7.99E-51 | ||
| Gene3D | 215 | 448 | 234 | 3.70E-61 | ||
| PANTHER | 217 | 449 | 233 | 3.80E-80 | – | |
| PANTHER | 217 | 449 | 233 | 3.80E-80 | – | |
| Pfam | 219 | 276 | 58 | 2.20E-08 | ||
| SMART | 240 | 262 | 23 | 6.4 | ||
| SMART | 240 | 259 | 20 | 100 | – | |
| ProSiteProfiles | 242 | 263 | 22 | 7.196 | ||
| SMART | 263 | 285 | 23 | 10 | ||
| SMART | 263 | 282 | 20 | 1.6 | – | |
| ProSiteProfiles | 265 | 286 | 22 | 7.843 | ||
| SMART | 286 | 309 | 24 | 0.0059 | ||
| SMART | 286 | 305 | 20 | 0.041 | – | |
| ProSiteProfiles | 288 | 309 | 22 | 7.327 | ||
| SMART | 309 | 328 | 20 | 86 | – | |
| SMART | 310 | 332 | 23 | 200 | ||
| ProSiteProfiles | 311 | 332 | 22 | 5.471 | ||
| SMART | 333 | 356 | 24 | 5 | ||
| SMART | 333 | 352 | 20 | 39 | – | |
| ProSiteProfiles | 335 | 356 | 22 | 6.426 | ||
| SMART | 356 | 375 | 20 | 220 | – | |
| ProSiteProfiles | 358 | 379 | 22 | 5.871 | ||
| SMART | 379 | 400 | 22 | 27 | – | |
| SMART | 379 | 403 | 25 | 25 | ||
| Pfam | 380 | 440 | 61 | 9.50E-11 | ||
| ProSiteProfiles | 381 | 401 | 21 | 6.257 | ||
| SMART | 404 | 423 | 20 | 7.6 | – | |
| SMART | 404 | 426 | 23 | 5.60E-04 | ||
| ProSiteProfiles | 406 | 427 | 22 | 7.897 | ||
| SMART | 427 | 450 | 24 | 130 | ||
| ProSiteProfiles | 429 | 449 | 21 | 5.386 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj4g3v1438580.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1438580.1, powered by CORGI.
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