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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1452010 |
| Transcript ID | Lj4g3v1452010.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: FKBP12-interacting protein of 37 kDa-like [Glycine max] gi|356562704|ref|XP_003549609.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 58 | 58 | – | – | |
| Coils | 62 | 96 | 35 | – | – | |
| PANTHER | 64 | 272 | 209 | 6.60E-115 | – | |
| PANTHER | 64 | 272 | 209 | 6.60E-115 | ||
| Pfam | 65 | 177 | 113 | 5.90E-07 | ||
| Coils | 118 | 138 | 21 | – | – | |
| Pfam | 134 | 271 | 138 | 1.80E-39 | ||
| Coils | 146 | 166 | 21 | – | – | |
| Coils | 187 | 207 | 21 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Regulation of alternative mRNA splicing, via spliceosome | Any process that modulates the frequency, rate or extent of alternative splicing of nuclear mRNAs. | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Biological process | MRNA methylation | The posttranscriptional addition of methyl groups to specific residues in an mRNA molecule. |
Expression pattern of Lj4g3v1452010.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1452010.1, powered by CORGI.
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