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Field | Value |
---|---|
Namespace | Biological process |
Short description | MRNA methylation |
Full defintion | The posttranscriptional addition of methyl groups to specific residues in an mRNA molecule. |
Subterm of |
The relationship of GO:0080009 with other GO terms.
Relationship type | GO terms |
---|---|
Is a | |
Regulates | n.a. |
Part of | n.a. |
Positively regulates | n.a. |
Negatively regulates | n.a. |
A force layout showing the ancestor tree for GO:0080009, and its immediate children. If you wish to explore the tree dynamically, please use the GO Explorer.
This table contains additional metadata associated with the GO entry's definition field.
Field | Value |
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PMID | MTA is an Arabidopsis messenger RNA adenosine methylase and interacts with a homolog of a sex-specific splicing factor. Plant Cell. 2008 May; 20 (5): 1278–88.PMID: 18505803 N6-Methyladenosine is a ubiquitous modification identified in the mRNA of numerous eukaryotes, where it is present within both coding and noncoding regions. However, this base modification does not alter the coding capacity, and its biological significance remains unclear. We show that Arabidopsis thaliana mRNA contains N6-methyladenosine at levels similar to those previously reported for animal cells. We further show that inactivation of the Arabidopsis ortholog of the yeast and human mRNA adenosine methylase (MTA) results in failure of the developing embryo to progress past the globular stage. We also demonstrate that the arrested seeds are deficient in mRNAs containing N6-methyladenosine. Expression of MTA is strongly associated with dividing tissues, particularly reproductive organs, shoot meristems, and emerging lateral roots. Finally, we show that MTA interacts in vitro and in vivo with At FIP37, a homolog of the Drosophila protein FEMALE LETHAL2D and of human WILMS' TUMOUR1-ASSOCIATING PROTEIN. The results reported here provide direct evidence for an essential function for N6-methyladenosine in a multicellular eukaryote, and the interaction with At FIP37 suggests possible RNA processing events that might be regulated or altered by this base modification. |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Transcript | Name | Description | GO terms | GO count |
---|---|---|---|---|
– | PREDICTED: FKBP12-interacting protein of 37 kDa-like [Cicer arietinum] gi|502133787|ref|XP_004501891.1| | 3 | ||
– | PREDICTED: FKBP12-interacting protein of 37 kDa-like [Cicer arietinum] gi|502133787|ref|XP_004501891.1| | 3 | ||
– | PREDICTED: FKBP12-interacting protein of 37 kDa-like [Glycine max] gi|356562704|ref|XP_003549609.1| | 3 | ||
– | FKBP12-interacting protein of 37 kDa-like protein, putative; TAIR: AT3G54170.1 FKBP12 interacting protein 37; Swiss-Prot: sp|Q9ZSZ8|FIP37_ARATH FKBP12-interacting protein of 37 kDa; TrEMBL-Plants: tr|I3S9G1|I3S9G1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0177000 | 3 | ||
– | FKBP12-interacting protein of 37 kDa; TAIR: AT3G54170.1 FKBP12 interacting protein 37; Swiss-Prot: sp|Q9ZSZ8|FIP37_ARATH FKBP12-interacting protein of 37 kDa; TrEMBL-Plants: tr|I1MTE4|I1MTE4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0230500 | 3 | ||
– | FKBP12-interacting protein of 37 kDa; TAIR: AT3G54170.1 FKBP12 interacting protein 37; Swiss-Prot: sp|Q9ZSZ8|FIP37_ARATH FKBP12-interacting protein of 37 kDa; TrEMBL-Plants: tr|I3T8J0|I3T8J0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0230500 | 3 |
A list of co-occurring GO terms within the L. japonicus gene space:
GO term | Namespace | Name | Observations | Saturation (%) |
---|---|---|---|---|
Biological process | MRNA methylation | 1 | 16.67 |