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GO:0001510

View this GO term in other databases

Overview

Field Value
Namespace Biological process
Short description RNA methylation
Full defintion Posttranscriptional addition of a methyl group to either a nucleotide or 2'-O ribose in a polyribonucleotide. Usually uses S-adenosylmethionine as a cofactor.
Subterm of

Relationships

The relationship of GO:0001510 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of n.a.
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

A force layout showing the ancestor tree for GO:0001510, and its immediate children. If you wish to explore the tree dynamically, please use the GO Explorer.

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Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
GOChjd

Associated Lotus transcripts 12

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
Lj0g3v0111399.1
– SAM (and some other nucleotide) binding motif; WW/Rsp5/WWP [Medicago truncatula] gi|87240722|gb|ABD32580.1|
GO terms
3
Lj0g3v0181439.1
– AGAMOUS-like 26 isoform 1 [Theobroma cacao] gi|508704835|gb|EOX96731.1|
GO terms
2
Lj0g3v0353039.1
– SAM (and some other nucleotide) binding motif; WW/Rsp5/WWP [Medicago truncatula] gi|87240722|gb|ABD32580.1|
GO terms
3
Lj2g3v2599880.1
– PREDICTED: ribosomal RNA large subunit methyltransferase E-like [Cicer arietinum] gi|502096998|ref|XP_004490883.1|
GO terms
2
Lj3g3v3360940.1
– PREDICTED: adoMet-dependent rRNA methyltransferase spb1-like [Glycine max] gi|356538763|ref|XP_003537870.1|
GO terms
2
Lj4g3v0286120.1
– PREDICTED: small RNA 2'-O-methyltransferase-like [Glycine max] gi|356510770|ref|XP_003524107.1|
GO terms
3
LotjaGi3g1v0509400.1
– Ribosomal RNA large subunit methyltransferase E; TAIR: AT4G25730.1 FtsJ-like methyltransferase family protein; Swiss-Prot: sp|Q5BH88|SPB1_EMENI AdoMet-dependent rRNA methyltransferase spb1; TrEMBL-Plants: tr|G7JTV9|G7JTV9_MEDTR Putative rRNA methyltransferase; Found in the gene: LotjaGi3g1v0509400
GO terms
2
LotjaGi4g1v0026400.1
– Small RNA 2'-O-methyltransferase; TAIR: AT4G20910.1 double-stranded RNA binding protein-related / DsRBD protein-like protein; Swiss-Prot: sp|Q9C5Q8|HEN1_ARATH Small RNA 2'-O-methyltransferase; TrEMBL-Plants: tr|I1K2Z2|I1K2Z2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0026400
GO terms
3
LotjaGi5g1v0027700.1
– Methyltransferase; TAIR: AT1G45231.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|P85107|TGS1_RAT Trimethylguanosine synthase; TrEMBL-Plants: tr|V7CRN8|V7CRN8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0027700
GO terms
3
LotjaGi5g1v0027700.2
– Methyltransferase; TAIR: AT1G45231.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|P85107|TGS1_RAT Trimethylguanosine synthase; TrEMBL-Plants: tr|V7CRN8|V7CRN8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0027700
GO terms
3
LotjaGi5g1v0261900.1
– TRNA (cytidine(34)-2'-O)-methyltransferase; TAIR: AT5G26880.1 tRNA (cytidine(34)-2'-O)-methyltransferase; Swiss-Prot: sp|P74516|TRML_SYNY3 Putative tRNA (cytidine(34)-2'-O)-methyltransferase; TrEMBL-Plants: tr|I3S4V5|I3S4V5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0261900
GO terms
2
LotjaGi6g1v0332700.6
– Ribosomal RNA large subunit methyltransferase E; TAIR: AT5G01230.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q9UET6|TRM7_HUMAN Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; TrEMBL-Plants: tr|I1MEI2|I1MEI2_SOYBN Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Found in the gene: LotjaGi6g1v0332700
GO terms
2

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
GO:0008168
Molecular function Methyltransferase activity 1 8.33