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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1500410 |
| Transcript ID | Lj4g3v1500410.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Metal transporter [Medicago truncatula] gi|357463543|ref|XP_003602053.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 379 | 379 | 2.10E-253 | ||
| Phobius | 1 | 19 | 19 | – | – | |
| PANTHER | 1 | 379 | 379 | 2.10E-253 | – | |
| Pfam | 4 | 267 | 264 | 2.60E-72 | ||
| PRINTS | 17 | 38 | 22 | 6.80E-44 | ||
| TMHMM | 20 | 42 | 23 | – | – | |
| Phobius | 20 | 41 | 22 | – | – | |
| Phobius | 42 | 60 | 19 | – | – | |
| Phobius | 61 | 82 | 22 | – | – | |
| TMHMM | 62 | 81 | 20 | – | – | |
| PRINTS | 67 | 90 | 24 | 6.80E-44 | ||
| Phobius | 83 | 102 | 20 | – | – | |
| Phobius | 103 | 127 | 25 | – | – | |
| TMHMM | 105 | 127 | 23 | – | – | |
| Phobius | 128 | 166 | 39 | – | – | |
| Phobius | 167 | 187 | 21 | – | – | |
| TMHMM | 168 | 190 | 23 | – | – | |
| PRINTS | 177 | 196 | 20 | 6.80E-44 | ||
| Phobius | 188 | 206 | 19 | – | – | |
| PRINTS | 205 | 222 | 18 | 6.80E-44 | ||
| Phobius | 207 | 226 | 20 | – | – | |
| TMHMM | 211 | 228 | 18 | – | – | |
| Phobius | 227 | 231 | 5 | – | – | |
| TMHMM | 232 | 254 | 23 | – | – | |
| Phobius | 232 | 256 | 25 | – | – | |
| PRINTS | 237 | 256 | 20 | 6.80E-44 | ||
| Phobius | 257 | 267 | 11 | – | – | |
| TMHMM | 266 | 288 | 23 | – | – | |
| Phobius | 268 | 288 | 21 | – | – | |
| Phobius | 289 | 307 | 19 | – | – | |
| TMHMM | 308 | 330 | 23 | – | – | |
| Phobius | 308 | 330 | 23 | – | – | |
| Phobius | 331 | 379 | 49 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Metal ion transport | The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Metal ion transmembrane transporter activity | Enables the transfer of metal ions from one side of a membrane to the other. |
Expression pattern of Lj4g3v1500410.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1500410.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.