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Lj4g3v1512510.1

Overview

Field Value
Gene ID Lj4g3v1512510
Transcript ID Lj4g3v1512510.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: serine/threonine-protein kinase HT1-like [Glycine max] gi|356513323|ref|XP_003525363.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR23257
31 322 292 1.90E-147 –
PANTHER
PTHR23257:SF475
31 322 292 1.90E-147
IPR015783
Gene3D
G3DSA:3.30.200.20
43 125 83 4.00E-20 –
SUPERFAMILY
SSF56112
48 312 265 1.29E-78
IPR011009
ProSiteProfiles
PS50011
58 316 259 40.852
IPR000719
SMART
SM00220
58 316 259 3.00E-60
IPR000719
Pfam
PF07714
60 312 253 1.30E-64
IPR001245
CDD
cd13999
65 312 248 1.19E-119 –
Gene3D
G3DSA:1.10.510.10
126 311 186 7.20E-61 –
PRINTS
PR00109
136 149 14 8.00E-17
IPR001245
PRINTS
PR00109
174 192 19 8.00E-17
IPR001245
ProSitePatterns
PS00108
180 192 13 –
IPR008271
PRINTS
PR00109
220 230 11 8.00E-17
IPR001245
PRINTS
PR00109
239 261 23 8.00E-17
IPR001245
PRINTS
PR00109
283 305 23 8.00E-17
IPR001245

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0004674
Molecular function Protein serine/threonine kinase activity Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of
GO:0071244
Biological process Cellular response to carbon dioxide Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbon dioxide (CO2) stimulus.
Subterm of

Genome browser

LORE1 insertions 50

Expression data

Expression pattern

Expression pattern of Lj4g3v1512510.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v1512510.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.