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Lj4g3v1514720.1

Overview

Field Value
Gene ID Lj4g3v1514720
Transcript ID Lj4g3v1514720.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: serine/threonine-protein kinase HT1-like [Glycine max] gi|356508671|ref|XP_003523078.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR23257
1 6 6 1.90E-186 –
ProSiteProfiles
PS50011
1 206 206 33.107
IPR000719
SMART
SM00220
1 206 206 2.00E-26
IPR000719
PANTHER
PTHR23257:SF512
1 6 6 1.90E-186 –
PIRSF
PIRSF000654
15 212 198 4.60E-47 –
Pfam
PF07714
18 202 185 2.50E-54
IPR001245
SUPERFAMILY
SSF56112
19 203 185 1.50E-62
IPR011009
CDD
cd13999
20 203 184 3.34E-90 –
PANTHER
PTHR23257:SF512
23 232 210 1.90E-186 –
PANTHER
PTHR23257
23 232 210 1.90E-186 –
PRINTS
PR00109
26 39 14 1.40E-16
IPR001245
Gene3D
G3DSA:1.10.510.10
28 207 180 2.00E-57 –
PRINTS
PR00109
64 82 19 1.40E-16
IPR001245
ProSitePatterns
PS00108
70 82 13 –
IPR008271
PRINTS
PR00109
130 152 23 1.40E-16
IPR001245
PRINTS
PR00109
174 196 23 1.40E-16
IPR001245

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 24

Expression data

Expression pattern

Expression pattern of Lj4g3v1514720.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v1514720.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.