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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1604460 |
| Transcript ID | Lj4g3v1604460.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | plasma membrane H+-ATPase [Sesbania rostrata] gi|31580855|dbj|BAC77532.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 136 | 136 | – | – | |
| PANTHER | 1 | 277 | 277 | 9.10E-257 | – | |
| PANTHER | 1 | 277 | 277 | 9.10E-257 | – | |
| SUPERFAMILY | 1 | 124 | 124 | 1.47E-26 | ||
| Pfam | 40 | 92 | 53 | 8.30E-10 | – | |
| Gene3D | 44 | 339 | 296 | 1.50E-100 | ||
| PRINTS | 50 | 66 | 17 | 3.90E-48 | ||
| TIGRFAM | 53 | 166 | 114 | 1.90E-28 | ||
| PRINTS | 78 | 97 | 20 | 3.70E-15 | – | |
| PRINTS | 78 | 94 | 17 | 3.90E-48 | ||
| PRINTS | 101 | 113 | 13 | 3.70E-15 | – | |
| PRINTS | 109 | 134 | 26 | 3.90E-48 | ||
| SUPERFAMILY | 127 | 341 | 215 | 2.62E-30 | – | |
| Phobius | 137 | 159 | 23 | – | – | |
| TMHMM | 137 | 159 | 23 | – | – | |
| Phobius | 160 | 164 | 5 | – | – | |
| Phobius | 165 | 182 | 18 | – | – | |
| Phobius | 183 | 201 | 19 | – | – | |
| TMHMM | 201 | 223 | 23 | – | – | |
| Phobius | 202 | 224 | 23 | – | – | |
| Phobius | 225 | 248 | 24 | – | – | |
| Phobius | 249 | 268 | 20 | – | – | |
| PRINTS | 254 | 275 | 22 | 3.90E-48 | ||
| Phobius | 269 | 279 | 11 | – | – | |
| TMHMM | 279 | 301 | 23 | – | – | |
| Phobius | 280 | 301 | 22 | – | – | |
| Phobius | 302 | 312 | 11 | – | – | |
| TMHMM | 311 | 330 | 20 | – | – | |
| Phobius | 313 | 330 | 18 | – | – | |
| PANTHER | 314 | 416 | 103 | 9.10E-257 | – | |
| PANTHER | 314 | 416 | 103 | 9.10E-257 | – | |
| Phobius | 331 | 443 | 113 | – | – | |
| Coils | 394 | 414 | 21 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of Lj4g3v1604460.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1604460.1, powered by CORGI.
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