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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1604490 |
| Transcript ID | Lj4g3v1604490.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable peptide/nitrate transporter At5g62680-like [Glycine max] gi|356513559|ref|XP_003525480.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 31 | 31 | – | – | |
| PANTHER | 1 | 609 | 609 | 0 | ||
| PANTHER | 1 | 609 | 609 | 0 | – | |
| Phobius | 1 | 114 | 114 | – | – | |
| SUPERFAMILY | 29 | 257 | 229 | 1.44E-22 | ||
| Gene3D | 55 | 248 | 194 | 6.40E-10 | – | |
| Pfam | 112 | 542 | 431 | 1.50E-77 | ||
| TMHMM | 115 | 134 | 20 | – | – | |
| Phobius | 115 | 135 | 21 | – | – | |
| Phobius | 136 | 161 | 26 | – | – | |
| TMHMM | 157 | 179 | 23 | – | – | |
| Phobius | 162 | 181 | 20 | – | – | |
| Phobius | 182 | 200 | 19 | – | – | |
| TMHMM | 200 | 222 | 23 | – | – | |
| Phobius | 201 | 222 | 22 | – | – | |
| Phobius | 223 | 227 | 5 | – | – | |
| TMHMM | 226 | 248 | 23 | – | – | |
| Phobius | 228 | 249 | 22 | – | – | |
| Phobius | 250 | 346 | 97 | – | – | |
| SUPERFAMILY | 334 | 585 | 252 | 1.44E-22 | ||
| Phobius | 347 | 367 | 21 | – | – | |
| Gene3D | 348 | 539 | 192 | 6.30E-04 | – | |
| TMHMM | 350 | 372 | 23 | – | – | |
| Phobius | 368 | 386 | 19 | – | – | |
| Phobius | 387 | 408 | 22 | – | – | |
| TMHMM | 387 | 409 | 23 | – | – | |
| Phobius | 409 | 428 | 20 | – | – | |
| TMHMM | 428 | 450 | 23 | – | – | |
| Phobius | 429 | 450 | 22 | – | – | |
| Phobius | 451 | 469 | 19 | – | – | |
| Phobius | 470 | 496 | 27 | – | – | |
| TMHMM | 477 | 499 | 23 | – | – | |
| Phobius | 497 | 516 | 20 | – | – | |
| Phobius | 517 | 541 | 25 | – | – | |
| TMHMM | 519 | 541 | 23 | – | – | |
| Phobius | 542 | 560 | 19 | – | – | |
| Phobius | 561 | 583 | 23 | – | – | |
| TMHMM | 561 | 583 | 23 | – | – | |
| Phobius | 584 | 610 | 27 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj4g3v1604490.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1604490.1, powered by CORGI.
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