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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1604500 |
| Transcript ID | Lj4g3v1604500.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable peptide/nitrate transporter At5g62680-like [Glycine max] gi|356513559|ref|XP_003525480.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 272 | 272 | 3.20E-175 | ||
| PANTHER | 1 | 272 | 272 | 3.20E-175 | – | |
| Phobius | 1 | 8 | 8 | – | – | |
| Pfam | 2 | 205 | 204 | 3.40E-40 | ||
| Phobius | 9 | 30 | 22 | – | – | |
| SUPERFAMILY | 10 | 248 | 239 | 2.09E-08 | ||
| Gene3D | 11 | 202 | 192 | 1.80E-04 | – | |
| TMHMM | 13 | 35 | 23 | – | – | |
| Phobius | 31 | 49 | 19 | – | – | |
| Phobius | 50 | 71 | 22 | – | – | |
| TMHMM | 50 | 72 | 23 | – | – | |
| Phobius | 72 | 91 | 20 | – | – | |
| TMHMM | 91 | 113 | 23 | – | – | |
| Phobius | 92 | 113 | 22 | – | – | |
| Phobius | 114 | 132 | 19 | – | – | |
| Phobius | 133 | 159 | 27 | – | – | |
| TMHMM | 140 | 162 | 23 | – | – | |
| Phobius | 160 | 179 | 20 | – | – | |
| Phobius | 180 | 204 | 25 | – | – | |
| TMHMM | 182 | 204 | 23 | – | – | |
| Phobius | 205 | 223 | 19 | – | – | |
| TMHMM | 224 | 246 | 23 | – | – | |
| Phobius | 224 | 246 | 23 | – | – | |
| Phobius | 247 | 273 | 27 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj4g3v1604500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1604500.1, powered by CORGI.
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