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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1614590 |
| Transcript ID | Lj4g3v1614590.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable peptide/nitrate transporter At5g28470-like [Cicer arietinum] gi|502152132|ref|XP_004508780.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 534 | 534 | 0 | – | |
| PANTHER | 1 | 534 | 534 | 0 | ||
| Phobius | 1 | 19 | 19 | – | – | |
| CDD | 1 | 193 | 193 | 7.91E-04 | ||
| SUPERFAMILY | 2 | 197 | 196 | 3.92E-20 | ||
| Gene3D | 4 | 196 | 193 | 2.40E-05 | – | |
| Phobius | 20 | 42 | 23 | – | – | |
| TMHMM | 20 | 42 | 23 | – | – | |
| Phobius | 43 | 53 | 11 | – | – | |
| Pfam | 51 | 477 | 427 | 1.70E-77 | ||
| TMHMM | 54 | 76 | 23 | – | – | |
| Phobius | 54 | 74 | 21 | – | – | |
| Phobius | 75 | 93 | 19 | – | – | |
| Phobius | 94 | 113 | 20 | – | – | |
| TMHMM | 96 | 118 | 23 | – | – | |
| Phobius | 114 | 139 | 26 | – | – | |
| TMHMM | 139 | 161 | 23 | – | – | |
| Phobius | 140 | 161 | 22 | – | – | |
| Phobius | 162 | 166 | 5 | – | – | |
| TMHMM | 165 | 187 | 23 | – | – | |
| Phobius | 167 | 188 | 22 | – | – | |
| Phobius | 189 | 279 | 91 | – | – | |
| SUPERFAMILY | 270 | 515 | 246 | 3.92E-20 | ||
| Phobius | 280 | 300 | 21 | – | – | |
| TMHMM | 283 | 300 | 18 | – | – | |
| Gene3D | 289 | 515 | 227 | 4.90E-04 | – | |
| Phobius | 301 | 326 | 26 | – | – | |
| TMHMM | 327 | 349 | 23 | – | – | |
| Phobius | 327 | 347 | 21 | – | – | |
| Phobius | 348 | 367 | 20 | – | – | |
| Phobius | 368 | 385 | 18 | – | – | |
| TMHMM | 370 | 385 | 16 | – | – | |
| Phobius | 386 | 404 | 19 | – | – | |
| TMHMM | 405 | 427 | 23 | – | – | |
| Phobius | 405 | 430 | 26 | – | – | |
| Phobius | 431 | 441 | 11 | – | – | |
| TMHMM | 440 | 462 | 23 | – | – | |
| Phobius | 442 | 464 | 23 | – | – | |
| Phobius | 465 | 488 | 24 | – | – | |
| TMHMM | 489 | 508 | 20 | – | – | |
| Phobius | 489 | 509 | 21 | – | – | |
| Phobius | 510 | 536 | 27 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj4g3v1614590.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1614590.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.