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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1614600 |
| Transcript ID | Lj4g3v1614600.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable peptide/nitrate transporter At5g28470-like [Cicer arietinum] gi|502152132|ref|XP_004508780.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 467 | 467 | 0 | – | |
| PANTHER | 1 | 467 | 467 | 0 | ||
| Phobius | 1 | 26 | 26 | – | – | |
| Pfam | 13 | 410 | 398 | 1.20E-75 | ||
| SUPERFAMILY | 27 | 130 | 104 | 1.70E-16 | ||
| Gene3D | 27 | 129 | 103 | 5.20E-04 | – | |
| Phobius | 27 | 46 | 20 | – | – | |
| TMHMM | 29 | 51 | 23 | – | – | |
| Phobius | 47 | 72 | 26 | – | – | |
| TMHMM | 72 | 94 | 23 | – | – | |
| Phobius | 73 | 94 | 22 | – | – | |
| Phobius | 95 | 99 | 5 | – | – | |
| TMHMM | 98 | 120 | 23 | – | – | |
| Phobius | 100 | 121 | 22 | – | – | |
| Phobius | 122 | 212 | 91 | – | – | |
| SUPERFAMILY | 203 | 448 | 246 | 1.70E-16 | ||
| Phobius | 213 | 233 | 21 | – | – | |
| TMHMM | 216 | 233 | 18 | – | – | |
| Gene3D | 222 | 448 | 227 | 3.40E-04 | – | |
| Phobius | 234 | 259 | 26 | – | – | |
| Phobius | 260 | 280 | 21 | – | – | |
| TMHMM | 260 | 282 | 23 | – | – | |
| Phobius | 281 | 300 | 20 | – | – | |
| Phobius | 301 | 318 | 18 | – | – | |
| TMHMM | 303 | 318 | 16 | – | – | |
| Phobius | 319 | 337 | 19 | – | – | |
| TMHMM | 338 | 360 | 23 | – | – | |
| Phobius | 338 | 363 | 26 | – | – | |
| Phobius | 364 | 374 | 11 | – | – | |
| TMHMM | 373 | 395 | 23 | – | – | |
| Phobius | 375 | 397 | 23 | – | – | |
| Phobius | 398 | 421 | 24 | – | – | |
| TMHMM | 422 | 441 | 20 | – | – | |
| Phobius | 422 | 442 | 21 | – | – | |
| Phobius | 443 | 469 | 27 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj4g3v1614600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1614600.1, powered by CORGI.
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