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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1881470 |
| Transcript ID | Lj4g3v1881470.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: topless-related protein 4-like isoform X1 [Cicer arietinum] gi|502151499|ref|XP_004508471.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 1119 | 1119 | 0 | ||
| PANTHER | 1 | 1119 | 1119 | 0 | – | |
| ProSiteProfiles | 4 | 36 | 33 | 10.072 | ||
| SMART | 4 | 36 | 33 | 9.30E-05 | ||
| SMART | 34 | 92 | 59 | 1.50E-14 | ||
| ProSiteProfiles | 34 | 92 | 59 | 13.704 | ||
| SMART | 347 | 386 | 40 | 8.4 | ||
| SUPERFAMILY | 348 | 450 | 103 | 5.49E-08 | ||
| Gene3D | 359 | 671 | 313 | 3.30E-40 | ||
| SMART | 407 | 447 | 41 | 2.3 | ||
| ProSiteProfiles | 415 | 680 | 266 | 17.93 | ||
| SUPERFAMILY | 425 | 639 | 215 | 2.28E-42 | ||
| SMART | 453 | 494 | 42 | 1.10E-04 | ||
| ProSiteProfiles | 460 | 503 | 44 | 10.709 | ||
| Pfam | 460 | 494 | 35 | 8.80E-04 | ||
| ProSitePatterns | 481 | 495 | 15 | – | ||
| SMART | 497 | 538 | 42 | 0.016 | ||
| Pfam | 499 | 537 | 39 | 0.22 | ||
| SMART | 543 | 584 | 42 | 19 | ||
| SMART | 587 | 627 | 41 | 26 | ||
| Gene3D | 753 | 1102 | 350 | 1.90E-31 | ||
| SMART | 830 | 872 | 43 | 19 | ||
| ProSiteProfiles | 841 | 966 | 126 | 14.951 | ||
| SUPERFAMILY | 844 | 962 | 119 | 2.28E-42 | ||
| SMART | 875 | 915 | 41 | 1.9 | ||
| SMART | 918 | 957 | 40 | 6.10E-06 | ||
| Pfam | 924 | 957 | 34 | 0.0018 | ||
| ProSiteProfiles | 925 | 966 | 42 | 11.979 | ||
| SUPERFAMILY | 925 | 1107 | 183 | 2.35E-12 | – | |
| SMART | 1009 | 1050 | 42 | 310 | ||
| MobiDBLite | 1103 | 1136 | 34 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of Lj4g3v1881470.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1881470.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.