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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1881890 |
| Transcript ID | Lj4g3v1881890.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: CCR4-NOT transcription complex subunit 10-like [Glycine max] gi|356562973|ref|XP_003549742.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 317 | 316 | 1.80E-187 | – | |
| PANTHER | 2 | 317 | 316 | 1.80E-187 | – | |
| Gene3D | 69 | 208 | 140 | 5.40E-19 | ||
| SUPERFAMILY | 69 | 203 | 135 | 2.75E-10 | ||
| SMART | 108 | 141 | 34 | 1.3 | ||
| ProSiteProfiles | 108 | 141 | 34 | 5.841 | ||
| SMART | 158 | 191 | 34 | 140 | ||
| PANTHER | 334 | 572 | 239 | 1.80E-187 | – | |
| PANTHER | 334 | 572 | 239 | 1.80E-187 | – | |
| SUPERFAMILY | 361 | 445 | 85 | 3.92E-08 | ||
| Gene3D | 376 | 441 | 66 | 5.40E-19 | ||
| Gene3D | 490 | 557 | 68 | 5.40E-19 | ||
| SUPERFAMILY | 494 | 555 | 62 | 3.92E-08 | ||
| ProSiteProfiles | 496 | 529 | 34 | 9.058 | ||
| ProSiteProfiles | 496 | 529 | 34 | 8.113 | ||
| SMART | 496 | 529 | 34 | 24 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj4g3v1881890.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1881890.1, powered by CORGI.
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