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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1946670 |
| Transcript ID | Lj4g3v1946670.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable anion transporter 6, chloroplastic-like [Glycine max] gi|356546138|ref|XP_003541488.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 161 | 161 | – | – | |
| PANTHER | 53 | 515 | 463 | 8.70E-304 | – | |
| PANTHER | 53 | 515 | 463 | 8.70E-304 | – | |
| Coils | 60 | 80 | 21 | – | – | |
| SUPERFAMILY | 84 | 510 | 427 | 5.62E-70 | ||
| Gene3D | 92 | 266 | 175 | 1.90E-38 | – | |
| ProSiteProfiles | 96 | 507 | 412 | 25.329 | ||
| CDD | 97 | 503 | 407 | 3.55E-39 | ||
| Pfam | 102 | 467 | 366 | 2.00E-53 | ||
| TMHMM | 162 | 184 | 23 | – | – | |
| Phobius | 162 | 183 | 22 | – | – | |
| Phobius | 184 | 188 | 5 | – | – | |
| Phobius | 189 | 209 | 21 | – | – | |
| Phobius | 210 | 220 | 11 | – | – | |
| Phobius | 221 | 240 | 20 | – | – | |
| TMHMM | 222 | 244 | 23 | – | – | |
| Phobius | 241 | 251 | 11 | – | – | |
| TMHMM | 251 | 270 | 20 | – | – | |
| Phobius | 252 | 270 | 19 | – | – | |
| Phobius | 271 | 317 | 47 | – | – | |
| Gene3D | 307 | 508 | 202 | 9.00E-23 | – | |
| TMHMM | 317 | 339 | 23 | – | – | |
| Phobius | 318 | 339 | 22 | – | – | |
| Phobius | 340 | 358 | 19 | – | – | |
| TMHMM | 346 | 368 | 23 | – | – | |
| Phobius | 359 | 380 | 22 | – | – | |
| Phobius | 381 | 391 | 11 | – | – | |
| Phobius | 392 | 413 | 22 | – | – | |
| Phobius | 414 | 418 | 5 | – | – | |
| TMHMM | 419 | 441 | 23 | – | – | |
| Phobius | 419 | 439 | 21 | – | – | |
| Phobius | 440 | 450 | 11 | – | – | |
| TMHMM | 448 | 470 | 23 | – | – | |
| Phobius | 451 | 475 | 25 | – | – | |
| Phobius | 476 | 480 | 5 | – | – | |
| Phobius | 481 | 503 | 23 | – | – | |
| TMHMM | 485 | 504 | 20 | – | – | |
| Phobius | 504 | 515 | 12 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj4g3v1946670.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1946670.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.