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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1968830 |
| Transcript ID | Lj4g3v1968830.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Major facilitator superfamily protein isoform 1 [Theobroma cacao] gi|508784001|gb|EOY31257.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 56 | 56 | – | – | |
| SUPERFAMILY | 5 | 176 | 172 | 4.84E-10 | ||
| PANTHER | 11 | 551 | 541 | 0 | – | |
| PANTHER | 11 | 551 | 541 | 0 | – | |
| Pfam | 11 | 238 | 228 | 1.10E-73 | ||
| Gene3D | 12 | 178 | 167 | 1.10E-06 | – | |
| TMHMM | 57 | 79 | 23 | – | – | |
| Phobius | 57 | 78 | 22 | – | – | |
| Phobius | 79 | 83 | 5 | – | – | |
| Phobius | 84 | 109 | 26 | – | – | |
| TMHMM | 86 | 108 | 23 | – | – | |
| Phobius | 110 | 120 | 11 | – | – | |
| Phobius | 121 | 140 | 20 | – | – | |
| TMHMM | 123 | 145 | 23 | – | – | |
| Phobius | 141 | 151 | 11 | – | – | |
| TMHMM | 152 | 171 | 20 | – | – | |
| Phobius | 152 | 174 | 23 | – | – | |
| Phobius | 175 | 185 | 11 | – | – | |
| TMHMM | 186 | 204 | 19 | – | – | |
| Phobius | 186 | 205 | 20 | – | – | |
| SUPERFAMILY | 202 | 253 | 52 | 1.31E-18 | ||
| Phobius | 206 | 216 | 11 | – | – | |
| Phobius | 217 | 236 | 20 | – | – | |
| TMHMM | 217 | 236 | 20 | – | – | |
| Phobius | 237 | 333 | 97 | – | – | |
| MobiDBLite | 249 | 282 | 34 | – | – | |
| SUPERFAMILY | 316 | 536 | 221 | 1.31E-18 | ||
| Gene3D | 333 | 531 | 199 | 3.70E-07 | – | |
| Phobius | 334 | 356 | 23 | – | – | |
| TMHMM | 334 | 356 | 23 | – | – | |
| Phobius | 357 | 367 | 11 | – | – | |
| Phobius | 368 | 389 | 22 | – | – | |
| TMHMM | 369 | 386 | 18 | – | – | |
| Phobius | 390 | 400 | 11 | – | – | |
| TMHMM | 401 | 419 | 19 | – | – | |
| Phobius | 401 | 420 | 20 | – | – | |
| Phobius | 421 | 425 | 5 | – | – | |
| TMHMM | 426 | 448 | 23 | – | – | |
| Phobius | 426 | 445 | 20 | – | – | |
| Phobius | 446 | 456 | 11 | – | – | |
| Phobius | 457 | 480 | 24 | – | – | |
| TMHMM | 458 | 480 | 23 | – | – | |
| Phobius | 481 | 510 | 30 | – | – | |
| Phobius | 511 | 532 | 22 | – | – | |
| TMHMM | 512 | 534 | 23 | – | – | |
| Phobius | 533 | 555 | 23 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of Lj4g3v1968830.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1968830.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.