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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1969840 |
| Transcript ID | Lj4g3v1969840.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Transmembrane protein [Medicago truncatula] gi|357478409|ref|XP_003609490.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 9 | 9 | – | – | |
| Phobius | 1 | 30 | 30 | – | – | |
| SignalP | 1 | 27 | 27 | – | – | |
| PANTHER | 1 | 270 | 270 | 5.00E-91 | – | |
| PANTHER | 1 | 270 | 270 | 5.00E-91 | – | |
| TMHMM | 10 | 32 | 23 | – | – | |
| Phobius | 10 | 21 | 12 | – | – | |
| Phobius | 22 | 30 | 9 | – | – | |
| Phobius | 31 | 101 | 71 | – | – | |
| Gene3D | 49 | 167 | 119 | 5.70E-04 | ||
| TMHMM | 101 | 123 | 23 | – | – | |
| Phobius | 102 | 128 | 27 | – | – | |
| Phobius | 129 | 139 | 11 | – | – | |
| Phobius | 140 | 165 | 26 | – | – | |
| TMHMM | 143 | 165 | 23 | – | – | |
| Phobius | 166 | 249 | 84 | – | – | |
| Phobius | 250 | 269 | 20 | – | – | |
| TMHMM | 252 | 269 | 18 | – | – | |
| Phobius | 270 | 270 | 1 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cation transport | The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Cation transmembrane transporter activity | Enables the transfer of cation from one side of a membrane to the other. |
Expression pattern of Lj4g3v1969840.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1969840.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.