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Lj4g3v2139650.1

Overview

Field Value
Gene ID Lj4g3v2139650
Transcript ID Lj4g3v2139650.1
Lotus japonicus genome version MG20 v3.0
Description leucine rich repeat protein [Lotus japonicus] gi|283132365|dbj|BAI63588.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 23 23 – –
SUPERFAMILY
SSF52058
24 225 202 8.26E-34
IPR032675
Gene3D
G3DSA:3.80.10.10
31 131 101 5.80E-23
IPR032675
PANTHER
PTHR23155
33 225 193 1.60E-38 –
SMART
SM00364
53 72 20 170 –
SMART
SM00369
53 76 24 17
IPR003591
Pfam
PF13855
58 113 56 8.50E-09
IPR001611
SMART
SM00369
77 99 23 8.5
IPR003591
SMART
SM00364
77 96 20 380 –
SMART
SM00369
100 123 24 0.3
IPR003591
SMART
SM00364
100 119 20 20 –
SMART
SM00364
123 142 20 6.6 –
SMART
SM00369
124 146 23 130
IPR003591
Pfam
PF13855
125 177 53 2.30E-06
IPR001611
Gene3D
G3DSA:3.80.10.10
132 225 94 4.50E-16
IPR032675
SMART
SM00364
147 166 20 71 –
SMART
SM00369
147 169 23 13
IPR003591
SMART
SM00369
170 193 24 8.1
IPR003591
SMART
SM00364
170 189 20 100 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of

Genome browser

LORE1 insertions 1

Expression data

Expression pattern

Expression pattern of Lj4g3v2139650.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v2139650.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.