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Lj4g3v2140190.1

Overview

Field Value
Gene ID Lj4g3v2140190
Transcript ID Lj4g3v2140190.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description Lysine-specific demethylase NO66 [Medicago truncatula] gi|357479435|ref|XP_003610003.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite 1 20 20
SUPERFAMILY 63 147 85 8.78E-07
PANTHER 65 771 707 4.10E-202
PANTHER 65 771 707 4.10E-202
Gene3D 74 161 88 2.50E-04
SUPERFAMILY 297 381 85 7.14E-29
Gene3D 298 356 59 9.60E-28
Gene3D 411 562 152 9.60E-28
SUPERFAMILY 415 587 173 7.14E-29
ProSiteProfiles 425 583 159 16.586
Pfam 440 564 125 1.20E-21
SUPERFAMILY 602 659 58 8.78E-07

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Expression data

Expression pattern

Expression pattern of Lj4g3v2140190.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v2140190.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.