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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2227880 |
| Transcript ID | Lj4g3v2227880.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ABC transporter B family member 21-like isoform X2 [Cicer arietinum] gi|502150699|ref|XP_004508080.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 66 | 66 | – | – | |
| Phobius | 1 | 82 | 82 | – | – | |
| PANTHER | 2 | 260 | 259 | 7.30E-126 | – | |
| PANTHER | 2 | 260 | 259 | 7.30E-126 | – | |
| SUPERFAMILY | 74 | 258 | 185 | 7.98E-35 | ||
| Gene3D | 75 | 255 | 181 | 1.20E-31 | – | |
| Phobius | 83 | 107 | 25 | – | – | |
| TMHMM | 83 | 105 | 23 | – | – | |
| Pfam | 86 | 258 | 173 | 9.80E-39 | ||
| ProSiteProfiles | 87 | 263 | 177 | 28.936 | ||
| Phobius | 108 | 126 | 19 | – | – | |
| Phobius | 127 | 149 | 23 | – | – | |
| TMHMM | 128 | 150 | 23 | – | – | |
| Phobius | 150 | 212 | 63 | – | – | |
| Phobius | 213 | 243 | 31 | – | – | |
| TMHMM | 220 | 242 | 23 | – | – | |
| Phobius | 244 | 263 | 20 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | ATPase activity, coupled to transmembrane movement of substances | Catalysis of the reaction: ATP + H2O = ADP + phosphate, to directly drive the active transport of a substance across a membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj4g3v2227880.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2227880.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.