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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PTHR24221
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 135 results. Now displaying 1 of 3 with 50 rows per page. This search has taken 0.045s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0048519.1
n.a. PREDICTED: ABC transporter B family member 28-like [Glycine max] gi|356530907|ref|XP_003534020.1| chr0 16341719 16348251 -
1 domain prediction
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Lj0g3v0048519.2
n.a. PREDICTED: ABC transporter B family member 28-like [Cicer arietinum] gi|502165769|ref|XP_004513684.1| chr0 16341719 16348251 -
1 domain prediction
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Lj0g3v0066079.1
n.a. PREDICTED: ABC transporter B family member 4-like [Glycine max] gi|356499544|ref|XP_003518599.1| chr0 23131074 23138102 +
1 domain prediction
 –
Lj0g3v0068559.1
n.a. n.a. chr0 24564625 24570218 +
1 domain prediction
 –
Lj0g3v0068559.3
n.a. n.a. chr0 24565605 24570218 +
1 domain prediction
 –
Lj0g3v0285989.1
n.a. ABC transporter B family member [Medicago truncatula] gi|357463203|ref|XP_003601883.1| chr0 148513399 148520767 +
1 domain prediction
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Lj0g3v0304749.1
n.a. PREDICTED: ABC transporter B family member 2-like [Glycine max] gi|356497653|ref|XP_003517674.1| chr0 158742776 158749005 +
1 domain prediction
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Lj0g3v0304759.1
n.a. PREDICTED: ABC transporter B family member 2-like [Glycine max] gi|356497653|ref|XP_003517674.1| chr0 158746892 158750007 +
1 domain prediction
 –
Lj0g3v0323809.1
n.a. ABC transporter ATP-binding protein [Medicago truncatula] gi|357479203|ref|XP_003609887.1| chr0 169137575 169139007 -
1 domain prediction
 –
Lj1g3v0809800.1
n.a. PREDICTED: ABC transporter B family member 25-like [Glycine max] gi|356513473|ref|XP_003525438.1| chr1 10628448 10634642 -
1 domain prediction
 –
Lj1g3v4591210.1
n.a. PREDICTED: ABC transporter B family member 1-like [Glycine max] gi|356503728|ref|XP_003520656.1| chr1 55004859 55005902 -
1 domain prediction
 –
Lj1g3v4591220.1
n.a. PREDICTED: ABC transporter B family member 1-like, partial [Cicer arietinum] gi|502111456|ref|XP_004494063.1| chr1 55006170 55013726 -
1 domain prediction
 –
Lj1g3v4830300.1
n.a. ATP-binding cassette protein [Lotus japonicus] gi|396080274|dbj|BAM33973.1| chr1 58339006 58347196 -
1 domain prediction
 –
Lj1g3v4830300.2
n.a. ATP-binding cassette protein [Lotus japonicus] gi|396080274|dbj|BAM33973.1| chr1 58348664 58354562 -
1 domain prediction
 –
Lj2g3v0451470.1
n.a. PREDICTED: ABC transporter B family member 28-like [Cicer arietinum] gi|502165769|ref|XP_004513684.1| chr2 6530159 6536664 +
1 domain prediction
 –
Lj2g3v0451470.2
n.a. PREDICTED: ABC transporter B family member 28-like [Cicer arietinum] gi|502165769|ref|XP_004513684.1| chr2 6530159 6536664 +
1 domain prediction
 –
Lj2g3v0855230.1
n.a. multidrug/pheromone exporter, MDR family, ABC transporter family [Populus trichocarpa] gi|224143631|ref|XP_002325023.1| chr2 13160526 13169142 +
1 domain prediction
 –
Lj2g3v1022420.1
n.a. PREDICTED: ABC transporter B family member 15-like [Cicer arietinum] gi|502090823|ref|XP_004489352.1| chr2 16070382 16073857 -
1 domain prediction
 –
Lj2g3v1022430.1
n.a. PREDICTED: ABC transporter B family member 15-like [Cicer arietinum] gi|502090823|ref|XP_004489352.1| chr2 16074973 16079968 -
1 domain prediction
 –
Lj2g3v1022510.1
n.a. PREDICTED: ABC transporter B family member 15-like [Cicer arietinum] gi|502090823|ref|XP_004489352.1| chr2 16109441 16117977 -
1 domain prediction
 –
Lj2g3v1022510.2
n.a. PREDICTED: ABC transporter B family member 15-like [Cicer arietinum] gi|502090823|ref|XP_004489352.1| chr2 16109599 16118873 -
1 domain prediction
 –
Lj2g3v1055960.1
n.a. PREDICTED: ABC transporter B family member 19-like [Cicer arietinum] gi|502090922|ref|XP_004489384.1| chr2 16696058 16704393 -
1 domain prediction
 –
Lj2g3v1425550.1
n.a. PREDICTED: ABC transporter B family member 26, chloroplastic-like isoform 1 [Glycine max] gi|356501630|ref|XP_003519627.1| chr2 22509013 22519768 +
1 domain prediction
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Lj2g3v1426600.1
n.a. PREDICTED: ABC transporter B family member 26, chloroplastic-like [Cicer arietinum] gi|502166936|ref|XP_004514017.1| chr2 22546213 22556781 -
1 domain prediction
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Lj2g3v1426600.2
n.a. PREDICTED: ABC transporter B family member 26, chloroplastic-like [Glycine max] gi|356560569|ref|XP_003548563.1| chr2 22546213 22549705 -
1 domain prediction
 –
Lj2g3v1426600.3
n.a. PREDICTED: ABC transporter B family member 26, chloroplastic-like [Cicer arietinum] gi|502166936|ref|XP_004514017.1| chr2 22546213 22556781 -
1 domain prediction
 –
Lj3g3v1011060.1
n.a. ABC transporter B family member [Medicago truncatula] gi|357474799|ref|XP_003607685.1| chr3 13440468 13454026 +
1 domain prediction
 –
Lj3g3v2477640.1
n.a. ATP-binding cassette protein [Lotus japonicus] gi|396080274|dbj|BAM33973.1| chr3 30421082 30426720 +
1 domain prediction
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Lj3g3v2477650.1
n.a. n.a. chr3 30422998 30428375 -
1 domain prediction
 –
Lj3g3v2576200.1
n.a. PREDICTED: ABC transporter B family member 19-like [Cicer arietinum] gi|502156572|ref|XP_004510541.1| chr3 31603227 31611370 +
1 domain prediction
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Lj3g3v2576200.2
n.a. PREDICTED: ABC transporter B family member 19-like [Cicer arietinum] gi|502156572|ref|XP_004510541.1| chr3 31606669 31611370 +
1 domain prediction
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Lj4g3v1722980.1
n.a. PREDICTED: ABC transporter B family member 25-like isoform X1 [Cicer arietinum] gi|502151879|ref|XP_004508658.1| chr4 24803332 24808997 -
1 domain prediction
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Lj4g3v1722980.2
n.a. PREDICTED: ABC transporter B family member 25-like [Glycine max] gi|356513473|ref|XP_003525438.1| chr4 24803332 24809054 -
1 domain prediction
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Lj4g3v2226770.1
n.a. PREDICTED: ABC transporter B family member 11-like [Glycine max] gi|356565525|ref|XP_003550990.1| chr4 30876643 30878010 -
1 domain prediction
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Lj4g3v2226780.1
n.a. ABC transporter ATP-binding protein [Medicago truncatula] gi|357479203|ref|XP_003609887.1| chr4 30878070 30879578 -
1 domain prediction
 –
Lj4g3v2227820.1
n.a. ABC transporter B family member [Medicago truncatula] gi|357479199|ref|XP_003609885.1| chr4 30889551 30892439 -
1 domain prediction
 –
Lj4g3v2227830.1
n.a. ABC transporter B family member [Medicago truncatula] gi|357479199|ref|XP_003609885.1| chr4 30892388 30894392 -
1 domain prediction
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Lj4g3v2227840.1
n.a. PREDICTED: ABC transporter B family member 21-like [Cicer arietinum] gi|502150695|ref|XP_004508078.1| chr4 30894349 30895043 -
1 domain prediction
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Lj4g3v2227850.1
n.a. ABC transporter B family member [Medicago truncatula] gi|357479199|ref|XP_003609885.1| chr4 30897868 30898320 -
1 domain prediction
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Lj4g3v2227870.1
n.a. PREDICTED: ABC transporter B family member 11-like [Glycine max] gi|356545820|ref|XP_003541332.1| chr4 30899341 30899932 -
1 domain prediction
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Lj4g3v2227880.1
n.a. PREDICTED: ABC transporter B family member 21-like isoform X2 [Cicer arietinum] gi|502150699|ref|XP_004508080.1| chr4 30900038 30901347 -
1 domain prediction
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Lj4g3v2227890.1
n.a. PREDICTED: ABC transporter B family member 21-like [Cicer arietinum] gi|502150695|ref|XP_004508078.1| chr4 30901601 30902100 -
1 domain prediction
 –
Lj4g3v2227920.1
n.a. ABC transporter B family member [Medicago truncatula] gi|357479199|ref|XP_003609885.1| chr4 30906121 30909633 -
1 domain prediction
 –
Lj4g3v2227930.1
n.a. PREDICTED: ABC transporter B family member 21-like isoform X2 [Cicer arietinum] gi|502150699|ref|XP_004508080.1| chr4 30906756 30912569 -
1 domain prediction
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Lj5g3v0240200.1
n.a. PREDICTED: ABC transporter B family member 13-like [Cicer arietinum] gi|502126388|ref|XP_004499289.1| chr5 1981611 1988950 +
1 domain prediction
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Lj5g3v0780820.2
n.a. PREDICTED: ABC transporter B family member 29, chloroplastic-like [Cicer arietinum] gi|502111391|ref|XP_004494042.1| chr5 11354151 11360417 +
1 domain prediction
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Lj5g3v2182120.1
n.a. PREDICTED: ABC transporter B family member 2-like [Glycine max] gi|356497653|ref|XP_003517674.1| chr5 31519530 31526360 -
1 domain prediction
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Lj6g3v1952820.1
n.a. ABC transporter B family member [Medicago truncatula] gi|357447131|ref|XP_003593841.1| chr6 22415242 22415655 +
1 domain prediction
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Lj6g3v1952840.1
n.a. PREDICTED: ABC transporter B family member 9-like [Cicer arietinum] gi|502078526|ref|XP_004485974.1| chr6 22418869 22419347 +
1 domain prediction
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Lj6g3v1955260.1
n.a. PREDICTED: ABC transporter B family member 9-like [Cicer arietinum] gi|502078523|ref|XP_004485973.1| chr6 22471752 22472578 +
1 domain prediction
 –