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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2253540 |
| Transcript ID | Lj4g3v2253540.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: LOW QUALITY PROTEIN: beta-glucosidase-like SFR2, chloroplastic-like [Cicer arietinum] gi|502150768|ref|XP_004508114.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 23 | 23 | – | – | |
| Phobius | 1 | 23 | 23 | – | – | |
| SignalP | 1 | 18 | 18 | – | – | |
| Phobius | 1 | 3 | 3 | – | – | |
| SignalP | 1 | 23 | 23 | – | – | |
| Phobius | 4 | 15 | 12 | – | – | |
| Phobius | 16 | 23 | 8 | – | – | |
| Phobius | 24 | 366 | 343 | – | – | |
| Gene3D | 63 | 99 | 37 | 4.60E-101 | ||
| PANTHER | 68 | 617 | 550 | 0 | ||
| PANTHER | 68 | 617 | 550 | 0 | – | |
| MobiDBLite | 105 | 129 | 25 | – | – | |
| SUPERFAMILY | 151 | 542 | 392 | 1.16E-96 | ||
| Gene3D | 168 | 545 | 378 | 4.60E-101 | ||
| Pfam | 183 | 367 | 185 | 3.90E-33 | ||
| Phobius | 367 | 387 | 21 | – | – | |
| Pfam | 388 | 536 | 149 | 8.90E-23 | ||
| Phobius | 388 | 472 | 85 | – | – | |
| PRINTS | 393 | 407 | 15 | 1.60E-14 | ||
| PRINTS | 450 | 458 | 9 | 1.60E-14 | ||
| ProSitePatterns | 450 | 458 | 9 | – | ||
| PRINTS | 462 | 473 | 12 | 1.60E-14 | ||
| Phobius | 473 | 492 | 20 | – | – | |
| TMHMM | 473 | 495 | 23 | – | – | |
| PRINTS | 483 | 500 | 18 | 1.60E-14 | ||
| Phobius | 493 | 640 | 148 | – | – | |
| PRINTS | 507 | 519 | 13 | 1.60E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of Lj4g3v2253540.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2253540.1, powered by CORGI.
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