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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2289120 |
| Transcript ID | Lj4g3v2289120.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: topless-related protein 2-like [Cicer arietinum] gi|502150907|ref|XP_004508183.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 1110 | 1110 | 0 | – | |
| PANTHER | 1 | 1110 | 1110 | 0 | ||
| SMART | 4 | 36 | 33 | 1.70E-04 | ||
| ProSiteProfiles | 4 | 36 | 33 | 10.009 | ||
| SMART | 34 | 92 | 59 | 1.30E-11 | ||
| ProSiteProfiles | 34 | 92 | 59 | 12.562 | ||
| MobiDBLite | 265 | 285 | 21 | – | – | |
| Gene3D | 321 | 658 | 338 | 2.10E-41 | ||
| SUPERFAMILY | 331 | 438 | 108 | 2.38E-07 | ||
| SMART | 337 | 376 | 40 | 0.012 | ||
| ProSitePatterns | 363 | 377 | 15 | – | ||
| SMART | 398 | 437 | 40 | 28 | ||
| ProSiteProfiles | 405 | 669 | 265 | 13.791 | ||
| SMART | 441 | 484 | 44 | 4.30E-04 | ||
| Pfam | 450 | 484 | 35 | 0.0013 | ||
| ProSiteProfiles | 450 | 485 | 36 | 9.339 | ||
| SUPERFAMILY | 453 | 673 | 221 | 4.16E-44 | ||
| ProSitePatterns | 471 | 485 | 15 | – | ||
| SMART | 486 | 527 | 42 | 0.035 | ||
| SMART | 576 | 616 | 41 | 0.16 | ||
| ProSiteProfiles | 594 | 625 | 32 | 9.807 | ||
| ProSitePatterns | 603 | 617 | 15 | – | ||
| Gene3D | 764 | 1089 | 326 | 5.40E-34 | ||
| SMART | 823 | 858 | 36 | 140 | ||
| SUPERFAMILY | 830 | 948 | 119 | 4.16E-44 | ||
| SMART | 861 | 901 | 41 | 13 | ||
| ProSiteProfiles | 868 | 952 | 85 | 13.686 | ||
| SMART | 904 | 943 | 40 | 5.00E-06 | ||
| SUPERFAMILY | 907 | 1091 | 185 | 1.10E-12 | ||
| Pfam | 909 | 943 | 35 | 0.0019 | ||
| ProSiteProfiles | 911 | 952 | 42 | 12.714 | ||
| SMART | 993 | 1035 | 43 | 5.6 | ||
| SMART | 1055 | 1089 | 35 | 340 | ||
| MobiDBLite | 1099 | 1130 | 32 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of Lj4g3v2289120.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2289120.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.