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Lj4g3v2295530.1

Overview

Field Value
Gene ID Lj4g3v2295530
Transcript ID Lj4g3v2295530.1
Lotus japonicus genome version MG20 v3.0
Description p21-activated protein kinase-interacting protein 1-like protein [Medicago truncatula] gi|357450557|ref|XP_003595555.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:2.130.10.10
70 375 306 6.20E-43
IPR015943
SUPERFAMILY
SSF50978
72 375 304 1.16E-40
IPR017986
PANTHER
PTHR22844
89 220 132 5.00E-27 –
SMART
SM00320
92 129 38 0.017
IPR001680
ProSiteProfiles
PS50294
99 359 261 18.273
IPR017986
SMART
SM00320
132 176 45 0.016
IPR001680
SMART
SM00320
179 218 40 0.028
IPR001680
SMART
SM00320
261 298 38 360
IPR001680
PANTHER
PTHR22844
261 353 93 5.00E-27 –
SMART
SM00320
301 350 50 1.90E-05
IPR001680
Pfam
PF00400
329 350 22 0.012
IPR001680
ProSiteProfiles
PS50082
336 352 17 9.94
IPR001680
ProSitePatterns
PS00678
337 351 15 –
IPR019775
MobiDBLite
mobidb-lite
419 442 24 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of

Genome browser

LORE1 insertions 10

Expression data

Expression pattern

Expression pattern of Lj4g3v2295530.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v2295530.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.