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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2374810 |
| Transcript ID | Lj4g3v2374810.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pentatricopeptide repeat-containing protein At2g36980, mitochondrial-like [Glycine max] gi|356519999|ref|XP_003528655.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 21 | 21 | 5.612 | ||
| Pfam | 2 | 20 | 19 | 0.96 | ||
| PANTHER | 10 | 466 | 457 | 0 | – | |
| PANTHER | 10 | 466 | 457 | 0 | – | |
| ProSiteProfiles | 22 | 52 | 31 | 8.616 | ||
| Pfam | 24 | 52 | 29 | 0.0023 | ||
| ProSiteProfiles | 53 | 87 | 35 | 9.756 | ||
| Pfam | 55 | 99 | 45 | 5.20E-11 | ||
| TIGRFAM | 56 | 83 | 28 | 7.70E-07 | ||
| Gene3D | 59 | 105 | 47 | 1.10E-06 | ||
| ProSiteProfiles | 88 | 122 | 35 | 6.511 | ||
| ProSiteProfiles | 154 | 184 | 31 | 7.684 | ||
| Pfam | 156 | 182 | 27 | 0.0064 | ||
| TIGRFAM | 156 | 186 | 31 | 0.0012 | ||
| Gene3D | 157 | 330 | 174 | 1.10E-06 | ||
| ProSiteProfiles | 185 | 219 | 35 | 10.15 | ||
| TIGRFAM | 187 | 220 | 34 | 5.40E-06 | ||
| Pfam | 187 | 216 | 30 | 7.70E-07 | ||
| ProSiteProfiles | 255 | 285 | 31 | 5.009 | ||
| Pfam | 285 | 332 | 48 | 3.30E-11 | ||
| ProSiteProfiles | 286 | 320 | 35 | 12.43 | ||
| TIGRFAM | 288 | 322 | 35 | 8.70E-08 | ||
| ProSiteProfiles | 321 | 351 | 31 | 7.947 | ||
| Gene3D | 423 | 451 | 29 | 1.10E-06 | ||
| ProSiteProfiles | 425 | 459 | 35 | 9.032 | ||
| Pfam | 429 | 457 | 29 | 0.018 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj4g3v2374810.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2374810.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.