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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2374990 |
| Transcript ID | Lj4g3v2374990.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Pyrimidine-specific ribonucleoside hydrolase rihB [Medicago truncatula] gi|357478551|ref|XP_003609561.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 32 | 32 | – | – | |
| Phobius | 1 | 12 | 12 | – | – | |
| SignalP | 1 | 32 | 32 | – | – | |
| Phobius | 1 | 32 | 32 | – | – | |
| TMHMM | 13 | 35 | 23 | – | – | |
| Phobius | 13 | 24 | 12 | – | – | |
| Phobius | 25 | 32 | 8 | – | – | |
| Phobius | 33 | 893 | 861 | – | – | |
| Gene3D | 38 | 388 | 351 | 7.20E-67 | ||
| SUPERFAMILY | 41 | 388 | 348 | 1.96E-55 | ||
| Pfam | 42 | 381 | 340 | 9.00E-39 | ||
| PANTHER | 480 | 585 | 106 | 4.40E-247 | ||
| PANTHER | 480 | 585 | 106 | 4.40E-247 | – | |
| Gene3D | 504 | 867 | 364 | 7.50E-53 | ||
| SUPERFAMILY | 513 | 867 | 355 | 6.41E-46 | ||
| Pfam | 513 | 816 | 304 | 2.80E-39 | ||
| PANTHER | 602 | 629 | 28 | 4.40E-247 | ||
| PANTHER | 602 | 629 | 28 | 4.40E-247 | – | |
| PANTHER | 645 | 886 | 242 | 4.40E-247 | – | |
| PANTHER | 645 | 886 | 242 | 4.40E-247 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj4g3v2374990.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2374990.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.