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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2401070 |
| Transcript ID | Lj4g3v2401070.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: IAA-alanine resistance protein 1-like [Cicer arietinum] gi|502141718|ref|XP_004504604.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 27 | 27 | – | – | |
| Phobius | 1 | 33 | 33 | – | – | |
| SignalP | 1 | 25 | 25 | – | – | |
| PANTHER | 1 | 342 | 342 | 1.40E-97 | – | |
| PANTHER | 1 | 342 | 342 | 1.40E-97 | – | |
| Phobius | 1 | 3 | 3 | – | – | |
| Phobius | 4 | 15 | 12 | – | – | |
| Phobius | 16 | 33 | 18 | – | – | |
| MobiDBLite | 27 | 57 | 31 | – | – | |
| Phobius | 34 | 105 | 72 | – | – | |
| Pfam | 104 | 341 | 238 | 8.60E-24 | ||
| Phobius | 106 | 128 | 23 | – | – | |
| TMHMM | 111 | 133 | 23 | – | – | |
| Phobius | 129 | 139 | 11 | – | – | |
| Phobius | 140 | 159 | 20 | – | – | |
| TMHMM | 140 | 162 | 23 | – | – | |
| Phobius | 160 | 193 | 34 | – | – | |
| MobiDBLite | 168 | 191 | 24 | – | – | |
| Phobius | 194 | 213 | 20 | – | – | |
| TMHMM | 194 | 213 | 20 | – | – | |
| Phobius | 214 | 353 | 140 | – | – | |
| MobiDBLite | 226 | 320 | 95 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Metal ion transport | The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Metal ion transmembrane transporter activity | Enables the transfer of metal ions from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj4g3v2401070.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2401070.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.