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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2436050 |
| Transcript ID | Lj4g3v2436050.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Transmembrane 9 superfamily protein member [Medicago truncatula] gi|357491811|ref|XP_003616193.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 26 | 26 | – | – | |
| SignalP | 1 | 24 | 24 | – | – | |
| Phobius | 1 | 6 | 6 | – | – | |
| Phobius | 1 | 24 | 24 | – | – | |
| Phobius | 7 | 19 | 13 | – | – | |
| PANTHER | 10 | 593 | 584 | 0 | ||
| PANTHER | 10 | 593 | 584 | 0 | – | |
| Phobius | 20 | 24 | 5 | – | – | |
| Phobius | 25 | 227 | 203 | – | – | |
| Pfam | 54 | 550 | 497 | 7.10E-163 | ||
| Phobius | 228 | 251 | 24 | – | – | |
| TMHMM | 229 | 251 | 23 | – | – | |
| Phobius | 252 | 292 | 41 | – | – | |
| Phobius | 293 | 321 | 29 | – | – | |
| TMHMM | 295 | 317 | 23 | – | – | |
| Phobius | 322 | 326 | 5 | – | – | |
| Phobius | 327 | 347 | 21 | – | – | |
| TMHMM | 327 | 349 | 23 | – | – | |
| Phobius | 348 | 358 | 11 | – | – | |
| Phobius | 359 | 388 | 30 | – | – | |
| TMHMM | 362 | 384 | 23 | – | – | |
| Phobius | 389 | 393 | 5 | – | – | |
| Phobius | 394 | 416 | 23 | – | – | |
| TMHMM | 399 | 421 | 23 | – | – | |
| Phobius | 417 | 456 | 40 | – | – | |
| TMHMM | 455 | 477 | 23 | – | – | |
| Phobius | 457 | 478 | 22 | – | – | |
| Phobius | 479 | 483 | 5 | – | – | |
| Phobius | 484 | 506 | 23 | – | – | |
| TMHMM | 487 | 509 | 23 | – | – | |
| Phobius | 507 | 517 | 11 | – | – | |
| Phobius | 518 | 542 | 25 | – | – | |
| TMHMM | 522 | 544 | 23 | – | – | |
| Phobius | 543 | 553 | 11 | – | – | |
| Phobius | 554 | 576 | 23 | – | – | |
| TMHMM | 554 | 576 | 23 | – | – | |
| Phobius | 577 | 593 | 17 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of Lj4g3v2436050.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2436050.1, powered by CORGI.
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