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Lj4g3v2603870.1

Overview

Field Value
Gene ID Lj4g3v2603870
Transcript ID Lj4g3v2603870.1
Lotus japonicus genome version MG20 v3.0
Description Uncharacterized protein isoform 1 [Theobroma cacao] gi|508785080|gb|EOY32336.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 34 34
Phobius 1 15 15
Phobius 16 26 11
Phobius 27 34 8
Phobius 35 43 9
PANTHER 37 203 167 1.70E-83
PANTHER 37 203 167 1.70E-83
SUPERFAMILY 43 181 139 4.32E-41
Phobius 44 64 21
Gene3D 61 184 124 1.10E-40
Phobius 65 213 149
Pfam 68 175 108 4.60E-32

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

LORE1 insertions 15

Expression data

Expression pattern

Expression pattern of Lj4g3v2603870.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v2603870.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.