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Lj4g3v2605860.1

Overview

Field Value
Gene ID Lj4g3v2605860
Transcript ID Lj4g3v2605860.1
Lotus japonicus genome version MG20 v3.0
Description
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR27000
1 160 160 3.20E-62 –
PANTHER
PTHR27000:SF131
1 160 160 3.20E-62 –
Gene3D
G3DSA:3.80.10.10
2 155 154 2.30E-40
IPR032675
SUPERFAMILY
SSF52058
2 154 153 1.15E-34
IPR032675
Pfam
PF13516
49 63 15 0.48
IPR001611
Pfam
PF00560
73 93 21 0.86
IPR001611
PRINTS
PR00019
98 111 14 2.40E-05 –
PRINTS
PR00019
119 132 14 2.40E-05 –
Pfam
PF00560
121 134 14 0.11
IPR001611

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of

Genome browser

LORE1 insertions 33

Expression data

Expression pattern

Expression pattern of Lj4g3v2605860.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v2605860.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.