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Lj4g3v2665250.1

Overview

Field Value
Gene ID Lj4g3v2665250
Transcript ID Lj4g3v2665250.1
Lotus japonicus genome version MG20 v3.0
Description chloroplast protein import component Toc159 [Pisum sativum] gi|8489806|gb|AAF75761.1|AF262939_1
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 51 51 – –
Coils
Coil
6 26 21 – –
TIGRFAM
TIGR00993
92 851 760 0
IPR005690
MobiDBLite
mobidb-lite
97 118 22 – –
PANTHER
PTHR10903
129 847 719 0 –
PANTHER
PTHR10903:SF39
129 847 719 0 –
CDD
cd01853
176 429 254 6.51E-130 –
Gene3D
G3DSA:3.40.50.300
177 428 252 1.50E-67
IPR027417
SUPERFAMILY
SSF52540
198 360 163 6.58E-18
IPR027417
ProSiteProfiles
PS51720
204 438 235 54.129
IPR006703
Pfam
PF04548
208 341 134 6.00E-23
IPR006703
Coils
Coil
534 554 21 – –
MobiDBLite
mobidb-lite
548 573 26 – –
Pfam
PF11886
574 838 265 2.90E-128
IPR024283

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005525
Molecular function GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
Subterm of
GO:0016817
Molecular function Hydrolase activity, acting on acid anhydrides Catalysis of the hydrolysis of any acid anhydride.
Subterm of

Genome browser

LORE1 insertions 13

Expression data

Expression pattern

Expression pattern of Lj4g3v2665250.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v2665250.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.