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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2689690 |
| Transcript ID | Lj4g3v2689690.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: rab GDP dissociation inhibitor alpha-like [Cicer arietinum] gi|502140390|ref|XP_004504200.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 436 | 436 | 0 | – | |
| PANTHER | 1 | 436 | 436 | 0 | – | |
| SUPERFAMILY | 1 | 289 | 289 | 4.10E-60 | ||
| Gene3D | 1 | 50 | 50 | 2.40E-51 | ||
| Pfam | 1 | 433 | 433 | 1.70E-229 | ||
| PRINTS | 6 | 24 | 19 | 1.20E-70 | ||
| PRINTS | 16 | 28 | 13 | 4.30E-73 | ||
| PRINTS | 24 | 41 | 18 | 1.20E-70 | ||
| Gene3D | 51 | 228 | 178 | 2.10E-56 | – | |
| PRINTS | 69 | 86 | 18 | 1.20E-70 | ||
| PRINTS | 75 | 88 | 14 | 4.30E-73 | ||
| PRINTS | 86 | 102 | 17 | 1.20E-70 | ||
| PRINTS | 125 | 140 | 16 | 4.30E-73 | ||
| PRINTS | 135 | 150 | 16 | 1.20E-70 | ||
| PRINTS | 182 | 196 | 15 | 4.30E-73 | ||
| PRINTS | 212 | 229 | 18 | 1.20E-70 | ||
| Gene3D | 229 | 334 | 106 | 2.40E-51 | ||
| PRINTS | 230 | 251 | 22 | 1.20E-70 | ||
| PRINTS | 280 | 294 | 15 | 4.30E-73 | ||
| SUPERFAMILY | 292 | 389 | 98 | 7.98E-41 | – | |
| PRINTS | 323 | 339 | 17 | 4.30E-73 | ||
| PRINTS | 348 | 366 | 19 | 4.30E-73 | ||
| PRINTS | 381 | 400 | 20 | 4.30E-73 | ||
| SUPERFAMILY | 390 | 433 | 44 | 5.18E-12 | ||
| PRINTS | 402 | 422 | 21 | 4.30E-73 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GDP-dissociation inhibitor activity | Prevents the dissociation of GDP from a GTPase, thereby preventing GTP from binding. | ||
| Molecular function | Rab GDP-dissociation inhibitor activity | Prevents the dissociation of GDP from the small GTPase Rab, thereby preventing GTP from binding. | ||
| Biological process | Small GTPase mediated signal transduction | Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals. | ||
| Biological process | Protein transport | The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj4g3v2689690.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2689690.1, powered by CORGI.
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