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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2857420 |
| Transcript ID | Lj4g3v2857420.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: zinc transporter 11-like [Glycine max] gi|356527138|ref|XP_003532170.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 23 | 23 | – | – | |
| Phobius | 1 | 7 | 7 | – | – | |
| Phobius | 1 | 25 | 25 | – | – | |
| SignalP | 1 | 23 | 23 | – | – | |
| SignalP | 1 | 25 | 25 | – | – | |
| TMHMM | 7 | 24 | 18 | – | – | |
| Phobius | 8 | 19 | 12 | – | – | |
| Phobius | 20 | 25 | 6 | – | – | |
| Phobius | 26 | 48 | 23 | – | – | |
| PANTHER | 29 | 340 | 312 | 2.80E-187 | – | |
| PANTHER | 29 | 340 | 312 | 2.80E-187 | – | |
| TMHMM | 44 | 66 | 23 | – | – | |
| Phobius | 49 | 73 | 25 | – | – | |
| Pfam | 51 | 335 | 285 | 1.20E-47 | ||
| Phobius | 74 | 79 | 6 | – | – | |
| TMHMM | 79 | 101 | 23 | – | – | |
| Phobius | 80 | 101 | 22 | – | – | |
| Phobius | 102 | 115 | 14 | – | – | |
| Phobius | 116 | 137 | 22 | – | – | |
| TMHMM | 116 | 138 | 23 | – | – | |
| Phobius | 138 | 188 | 51 | – | – | |
| MobiDBLite | 151 | 173 | 23 | – | – | |
| TMHMM | 179 | 201 | 23 | – | – | |
| Phobius | 189 | 209 | 21 | – | – | |
| Phobius | 210 | 214 | 5 | – | – | |
| Phobius | 215 | 238 | 24 | – | – | |
| TMHMM | 216 | 238 | 23 | – | – | |
| Phobius | 239 | 249 | 11 | – | – | |
| TMHMM | 245 | 267 | 23 | – | – | |
| Phobius | 250 | 269 | 20 | – | – | |
| Phobius | 270 | 280 | 11 | – | – | |
| Phobius | 281 | 299 | 19 | – | – | |
| TMHMM | 282 | 304 | 23 | – | – | |
| Phobius | 300 | 318 | 19 | – | – | |
| TMHMM | 317 | 339 | 23 | – | – | |
| Phobius | 319 | 338 | 20 | – | – | |
| Phobius | 339 | 340 | 2 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Metal ion transport | The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Metal ion transmembrane transporter activity | Enables the transfer of metal ions from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj4g3v2857420.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2857420.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.