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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2951130 |
| Transcript ID | Lj4g3v2951130.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma-like [Glycine max] gi|356563880|ref|XP_003550185.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 23 | 23 | 5 | – | |
| Phobius | 1 | 11 | 11 | – | – | |
| Phobius | 12 | 33 | 22 | – | – | |
| TMHMM | 12 | 34 | 23 | – | – | |
| Phobius | 34 | 379 | 346 | – | – | |
| PANTHER | 35 | 379 | 345 | 2.20E-198 | – | |
| SUPERFAMILY | 64 | 124 | 61 | 1.13E-06 | ||
| ProSiteProfiles | 88 | 123 | 36 | 8.349 | ||
| Gene3D | 99 | 130 | 32 | 1.00E-05 | ||
| ProSitePatterns | 101 | 113 | 13 | – | ||
| Coils | 169 | 189 | 21 | – | – | |
| SUPERFAMILY | 183 | 346 | 164 | 2.69E-18 | ||
| Gene3D | 188 | 342 | 155 | 1.10E-10 | ||
| SUPERFAMILY | 195 | 226 | 32 | 1.13E-06 | ||
| ProSiteProfiles | 196 | 231 | 36 | 10.245 | ||
| Pfam | 199 | 301 | 103 | 1.30E-12 | ||
| ProSitePatterns | 209 | 221 | 13 | – | ||
| ProSiteProfiles | 271 | 306 | 36 | 7.205 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). |
Expression pattern of Lj4g3v2951130.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2951130.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.