Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj4g3v3060300.1

Overview

Field Value
Gene ID Lj4g3v3060300
Transcript ID Lj4g3v3060300.1
Related isoforms 2
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: casein kinase I isoform delta-like [Glycine max] gi|356523722|ref|XP_003530484.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11909:SF97
1 421 421 1.40E-291 –
PANTHER
PTHR11909
1 421 421 1.40E-291 –
Gene3D
G3DSA:3.30.200.20
2 85 84 8.80E-27 –
SUPERFAMILY
SSF56112
4 290 287 2.16E-83
IPR011009
CDD
cd14125
8 282 275 0 –
ProSiteProfiles
PS50011
9 277 269 28.923
IPR000719
Pfam
PF00069
9 227 219 6.70E-27
IPR000719
SMART
SM00220
9 278 270 1.70E-16
IPR000719
ProSitePatterns
PS00107
15 38 24 –
IPR017441
Gene3D
G3DSA:1.10.510.10
87 274 188 6.70E-41 –
ProSitePatterns
PS00108
124 136 13 –
IPR008271
MobiDBLite
mobidb-lite
306 326 21 – –
MobiDBLite
mobidb-lite
350 425 76 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 14

Expression data

Expression pattern

Expression pattern of Lj4g3v3060300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v3060300.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.