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| Field | Value |
|---|---|
| Gene ID | Lj4g3v3071670 |
| Transcript ID | Lj4g3v3071670.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Polyol/monosaccharide transporter 5 isoform 2 [Theobroma cacao] gi|508783541|gb|EOY30797.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 194 | 194 | 19.438 | ||
| CDD | 1 | 190 | 190 | 6.64E-11 | ||
| PANTHER | 1 | 220 | 220 | 1.50E-145 | – | |
| Phobius | 1 | 1 | 1 | – | – | |
| PANTHER | 1 | 220 | 220 | 1.50E-145 | – | |
| Phobius | 1 | 16 | 16 | – | – | |
| Phobius | 2 | 12 | 11 | – | – | |
| Pfam | 3 | 205 | 203 | 1.80E-45 | ||
| SUPERFAMILY | 5 | 202 | 198 | 1.24E-26 | ||
| Gene3D | 6 | 202 | 197 | 6.30E-20 | – | |
| PRINTS | 12 | 22 | 11 | 1.10E-08 | ||
| Phobius | 13 | 16 | 4 | – | – | |
| Phobius | 17 | 39 | 23 | – | – | |
| TMHMM | 39 | 61 | 23 | – | – | |
| Phobius | 40 | 61 | 22 | – | – | |
| ProSitePatterns | 57 | 74 | 18 | – | ||
| Phobius | 62 | 67 | 6 | – | – | |
| Phobius | 68 | 87 | 20 | – | – | |
| TMHMM | 71 | 93 | 23 | – | – | |
| Phobius | 88 | 98 | 11 | – | – | |
| Phobius | 99 | 128 | 30 | – | – | |
| TMHMM | 100 | 122 | 23 | – | – | |
| PRINTS | 106 | 127 | 22 | 1.10E-08 | ||
| PRINTS | 129 | 141 | 13 | 1.10E-08 | ||
| Phobius | 129 | 139 | 11 | – | – | |
| Phobius | 140 | 162 | 23 | – | – | |
| Phobius | 163 | 167 | 5 | – | – | |
| TMHMM | 166 | 188 | 23 | – | – | |
| Phobius | 168 | 190 | 23 | – | – | |
| Phobius | 191 | 224 | 34 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj4g3v3071670.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v3071670.1, powered by CORGI.
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