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| Field | Value |
|---|---|
| Gene ID | Lj4g3v3113080 |
| Transcript ID | Lj4g3v3113080.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ankyrin repeat-containing protein At2g01680-like [Cicer arietinum] gi|502138302|ref|XP_004503355.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 353 | 353 | – | – | |
| PANTHER | 1 | 539 | 539 | 0 | – | |
| PANTHER | 1 | 539 | 539 | 0 | – | |
| SUPERFAMILY | 15 | 295 | 281 | 1.19E-42 | ||
| Gene3D | 58 | 311 | 254 | 4.60E-45 | ||
| CDD | 59 | 186 | 128 | 2.77E-21 | – | |
| SMART | 62 | 92 | 31 | 39 | ||
| ProSiteProfiles | 62 | 275 | 214 | 35.915 | ||
| SMART | 97 | 126 | 30 | 0.79 | ||
| Pfam | 102 | 188 | 87 | 9.00E-12 | ||
| CDD | 128 | 254 | 127 | 2.27E-25 | – | |
| SMART | 131 | 161 | 31 | 160 | ||
| SMART | 165 | 194 | 30 | 0.46 | ||
| Pfam | 198 | 263 | 66 | 1.40E-10 | ||
| SMART | 199 | 228 | 30 | 4.4 | ||
| CDD | 228 | 296 | 69 | 8.23E-08 | – | |
| SMART | 233 | 263 | 31 | 9.20E-04 | ||
| ProSiteProfiles | 233 | 266 | 34 | 10.873 | ||
| Coils | 329 | 349 | 21 | – | – | |
| Pfam | 349 | 456 | 108 | 1.20E-22 | ||
| TMHMM | 354 | 376 | 23 | – | – | |
| Phobius | 354 | 376 | 23 | – | – | |
| Phobius | 377 | 395 | 19 | – | – | |
| TMHMM | 396 | 418 | 23 | – | – | |
| Phobius | 396 | 425 | 30 | – | – | |
| Phobius | 426 | 436 | 11 | – | – | |
| TMHMM | 435 | 457 | 23 | – | – | |
| Phobius | 437 | 459 | 23 | – | – | |
| Phobius | 460 | 464 | 5 | – | – | |
| Phobius | 465 | 490 | 26 | – | – | |
| TMHMM | 467 | 489 | 23 | – | – | |
| Phobius | 491 | 539 | 49 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj4g3v3113080.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v3113080.1, powered by CORGI.
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