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| Field | Value |
|---|---|
| Gene ID | Lj5g3v0081960 |
| Transcript ID | Lj5g3v0081960.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: protein TRANSPARENT TESTA 12-like [Glycine max] gi|356552151|ref|XP_003544433.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 217 | 217 | 8.50E-148 | – | |
| PANTHER | 1 | 217 | 217 | 8.50E-148 | – | |
| SignalP | 1 | 20 | 20 | – | – | |
| Phobius | 1 | 5 | 5 | – | – | |
| Pfam | 3 | 158 | 156 | 3.10E-25 | ||
| Phobius | 6 | 24 | 19 | – | – | |
| Phobius | 25 | 67 | 43 | – | – | |
| TMHMM | 28 | 50 | 23 | – | – | |
| Phobius | 68 | 92 | 25 | – | – | |
| TMHMM | 70 | 92 | 23 | – | – | |
| Phobius | 93 | 111 | 19 | – | – | |
| TMHMM | 112 | 134 | 23 | – | – | |
| Phobius | 112 | 134 | 23 | – | – | |
| Phobius | 135 | 140 | 6 | – | – | |
| Phobius | 141 | 165 | 25 | – | – | |
| TMHMM | 147 | 169 | 23 | – | – | |
| Phobius | 166 | 170 | 5 | – | – | |
| Phobius | 171 | 190 | 20 | – | – | |
| TMHMM | 174 | 196 | 23 | – | – | |
| Phobius | 191 | 218 | 28 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Antiporter activity | Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Xenobiotic transmembrane transporter activity | Enables the directed movement of a xenobiotic, a compound foreign to living organisms, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj5g3v0081960.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v0081960.1, powered by CORGI.
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