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Lj5g3v0091560.1

Overview

Field Value
Gene ID Lj5g3v0091560
Transcript ID Lj5g3v0091560.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 6-like isoform X2 [Cicer arietinum] gi|502176264|ref|XP_004515835.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR14145
1 114 114 8.30E-190 –
PANTHER
PTHR14145:SF1
1 114 114 8.30E-190 –
Pfam
PF10602
63 114 52 1.30E-09
IPR019585
Coils
Coil
71 98 28 – –
Pfam
PF10602
141 262 122 4.40E-38
IPR019585
PANTHER
PTHR14145:SF1
141 412 272 8.30E-190 –
PANTHER
PTHR14145
141 412 272 8.30E-190 –
Pfam
PF01399
278 380 103 2.40E-16
IPR000717
SUPERFAMILY
SSF46785
308 389 82 5.62E-17
IPR011991
SMART
SM00088
313 396 84 5.60E-22
IPR000717
SMART
SM00753
313 396 84 5.60E-22 –
Gene3D
G3DSA:1.10.10.10
314 389 76 1.70E-09
IPR011991

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Genome browser

LORE1 insertions 12

Expression data

Expression pattern

Expression pattern of Lj5g3v0091560.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v0091560.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.