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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR019585
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 9 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.448s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0098349.1
n.a. PREDICTED: COP9 signalosome complex subunit 1-like [Glycine max] gi|356505043|ref|XP_003521302.1| chr0 41623176 41626994 +
2 domain predictions
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Lj4g3v1389180.1
n.a. PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 6-like isoform X2 [Cicer arietinum] gi|502176264|ref|XP_004515835.1| chr4 21591232 21601994 -
2 domain predictions
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Lj5g3v0091560.1
n.a. PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 6-like isoform X2 [Cicer arietinum] gi|502176264|ref|XP_004515835.1| chr5 700394 704580 +
2 domain predictions
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Lj5g3v0091560.2
n.a. PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 6-like isoform X2 [Cicer arietinum] gi|502176264|ref|XP_004515835.1| chr5 700534 703916 +
2 domain predictions
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LotjaGi3g1v0376700.1
n.a. COP9 signalosome complex subunit 1; TAIR: AT3G61140.1 COP9 signalosome complex subunit 1; Swiss-Prot: sp|P45432|CSN1_ARATH COP9 signalosome complex subunit 1; TrEMBL-Plants: tr|I1JKE3|I1JKE3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0376700 LjG1.1_chr3 76926989 76931373 +
2 domain predictions
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LotjaGi4g1v0224400.1
n.a. 26S proteasome non-ATPase regulatory subunit; TAIR: AT4G24820.1 26S proteasome regulatory subunit Rpn7; Swiss-Prot: sp|Q93Y35|PSMD6_ARATH 26S proteasome non-ATPase regulatory subunit 6 homolog; TrEMBL-Plants: tr|A0A151TE54|A0A151TE54_CAJCA Putative 26S proteasome non-ATPase regulatory subunit 6; Found in the gene: LotjaGi4g1v0224400 LjG1.1_chr4 53011759 53023227 -
2 domain predictions
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LotjaGi4g1v0224400.2
n.a. 26S proteasome non-ATPase regulatory subunit; TAIR: AT4G24820.1 26S proteasome regulatory subunit Rpn7; Swiss-Prot: sp|Q93Y35|PSMD6_ARATH 26S proteasome non-ATPase regulatory subunit 6 homolog; TrEMBL-Plants: tr|A0A151TE54|A0A151TE54_CAJCA Putative 26S proteasome non-ATPase regulatory subunit 6; Found in the gene: LotjaGi4g1v0224400 LjG1.1_chr4 53012182 53023099 -
2 domain predictions
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LotjaGi4g1v0224400.3
n.a. 26S proteasome non-ATPase regulatory subunit; TAIR: AT4G24820.1 26S proteasome regulatory subunit Rpn7; Swiss-Prot: sp|Q93Y35|PSMD6_ARATH 26S proteasome non-ATPase regulatory subunit 6 homolog; TrEMBL-Plants: tr|A0A151TE54|A0A151TE54_CAJCA Putative 26S proteasome non-ATPase regulatory subunit 6; Found in the gene: LotjaGi4g1v0224400 LjG1.1_chr4 53012479 53022131 -
2 domain predictions
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LotjaGi5g1v0017400.1
n.a. 26S proteasome non-ATPase regulatory subunit; TAIR: AT4G24820.1 26S proteasome regulatory subunit Rpn7; Swiss-Prot: sp|Q93Y35|PSMD6_ARATH 26S proteasome non-ATPase regulatory subunit 6 homolog; TrEMBL-Plants: tr|V7CBH3|V7CBH3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0017400 LjG1.1_chr5 3460599 3465306 -
2 domain predictions
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