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| Field | Value |
|---|---|
| Gene ID | Lj5g3v0106080 |
| Transcript ID | Lj5g3v0106080.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: sugar transporter ERD6-like 6-like [Cicer arietinum] gi|502126054|ref|XP_004499162.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 26 | 26 | 0 | – | |
| Phobius | 1 | 46 | 46 | – | – | |
| PANTHER | 1 | 26 | 26 | 0 | – | |
| TIGRFAM | 41 | 483 | 443 | 4.30E-90 | ||
| PANTHER | 44 | 488 | 445 | 0 | – | |
| PANTHER | 44 | 488 | 445 | 0 | – | |
| TMHMM | 46 | 68 | 23 | – | – | |
| Phobius | 47 | 68 | 22 | – | – | |
| ProSiteProfiles | 52 | 476 | 425 | 45.321 | ||
| Pfam | 53 | 486 | 434 | 4.30E-94 | ||
| Gene3D | 53 | 227 | 175 | 3.50E-23 | – | |
| CDD | 53 | 472 | 420 | 7.97E-20 | ||
| SUPERFAMILY | 53 | 236 | 184 | 1.70E-56 | ||
| PRINTS | 60 | 70 | 11 | 2.00E-16 | ||
| Phobius | 69 | 87 | 19 | – | – | |
| TMHMM | 88 | 110 | 23 | – | – | |
| Phobius | 88 | 105 | 18 | – | – | |
| Phobius | 106 | 116 | 11 | – | – | |
| ProSitePatterns | 106 | 123 | 18 | – | ||
| Phobius | 117 | 137 | 21 | – | – | |
| TMHMM | 117 | 136 | 20 | – | – | |
| Phobius | 138 | 142 | 5 | – | – | |
| TMHMM | 142 | 164 | 23 | – | – | |
| PRINTS | 143 | 162 | 20 | 2.00E-16 | ||
| Phobius | 143 | 164 | 22 | – | – | |
| ProSitePatterns | 148 | 173 | 26 | – | ||
| Phobius | 165 | 175 | 11 | – | – | |
| Phobius | 176 | 194 | 19 | – | – | |
| TMHMM | 176 | 198 | 23 | – | – | |
| Phobius | 195 | 199 | 5 | – | – | |
| Phobius | 200 | 221 | 22 | – | – | |
| TMHMM | 202 | 221 | 20 | – | – | |
| Phobius | 222 | 280 | 59 | – | – | |
| SUPERFAMILY | 264 | 484 | 221 | 1.70E-56 | ||
| Gene3D | 277 | 482 | 206 | 8.30E-15 | – | |
| Phobius | 281 | 306 | 26 | – | – | |
| TMHMM | 282 | 304 | 23 | – | – | |
| PRINTS | 295 | 305 | 11 | 2.00E-16 | ||
| Phobius | 307 | 320 | 14 | – | – | |
| TMHMM | 319 | 341 | 23 | – | – | |
| Phobius | 321 | 341 | 21 | – | – | |
| Phobius | 342 | 347 | 6 | – | – | |
| Phobius | 348 | 370 | 23 | – | – | |
| TMHMM | 348 | 370 | 23 | – | – | |
| Phobius | 371 | 381 | 11 | – | – | |
| TMHMM | 380 | 402 | 23 | – | – | |
| Phobius | 382 | 410 | 29 | – | – | |
| PRINTS | 389 | 410 | 22 | 2.00E-16 | ||
| Phobius | 411 | 421 | 11 | – | – | |
| PRINTS | 412 | 424 | 13 | 2.00E-16 | ||
| TMHMM | 414 | 436 | 23 | – | – | |
| Phobius | 422 | 442 | 21 | – | – | |
| Phobius | 443 | 453 | 11 | – | – | |
| TMHMM | 451 | 473 | 23 | – | – | |
| Phobius | 454 | 472 | 19 | – | – | |
| Phobius | 473 | 488 | 16 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj5g3v0106080.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v0106080.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.