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Lj5g3v0238160.1

Overview

Field Value
Gene ID Lj5g3v0238160
Transcript ID Lj5g3v0238160.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: microtubule-associated protein futsch-like isoform X1 [Cicer arietinum] gi|502126381|ref|XP_004499286.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 992 992 0
PANTHER 1 992 992 0
Gene3D 61 149 89 6.70E-06
SUPERFAMILY 61 156 96 4.05E-07
MobiDBLite 240 267 28
MobiDBLite 293 315 23
MobiDBLite 358 389 32
MobiDBLite 418 444 27
MobiDBLite 481 543 63
MobiDBLite 631 659 29
MobiDBLite 687 727 41
MobiDBLite 959 998 40

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Cellular component Nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.

Expression data

Expression pattern

Expression pattern of Lj5g3v0238160.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v0238160.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.