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| Field | Value |
|---|---|
| Gene ID | Lj5g3v0254340 |
| Transcript ID | Lj5g3v0254340.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: LOW QUALITY PROTEIN: calcium-dependent protein kinase 29-like [Cicer arietinum] gi|502126439|ref|XP_004499307.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 399 | 399 | 0 | – | |
| ProSiteProfiles | 1 | 209 | 209 | 41.078 | ||
| SMART | 1 | 209 | 209 | 5.60E-62 | ||
| CDD | 1 | 208 | 208 | 4.23E-112 | – | |
| PANTHER | 1 | 399 | 399 | 0 | – | |
| Gene3D | 2 | 47 | 46 | 1.20E-14 | – | |
| Pfam | 2 | 209 | 208 | 1.10E-60 | ||
| SUPERFAMILY | 2 | 217 | 216 | 3.10E-67 | ||
| Gene3D | 48 | 225 | 178 | 4.00E-61 | – | |
| ProSitePatterns | 71 | 83 | 13 | – | ||
| Gene3D | 238 | 396 | 159 | 1.30E-47 | ||
| SUPERFAMILY | 248 | 389 | 142 | 8.24E-48 | ||
| ProSiteProfiles | 252 | 287 | 36 | 15.601 | ||
| SMART | 256 | 284 | 29 | 6.40E-06 | ||
| CDD | 257 | 316 | 60 | 1.48E-16 | ||
| Pfam | 257 | 317 | 61 | 4.00E-12 | ||
| ProSitePatterns | 265 | 277 | 13 | – | ||
| ProSiteProfiles | 288 | 323 | 36 | 11.584 | ||
| SMART | 292 | 320 | 29 | 0.0024 | ||
| ProSitePatterns | 301 | 313 | 13 | – | ||
| ProSiteProfiles | 324 | 359 | 36 | 14.709 | ||
| Pfam | 327 | 389 | 63 | 4.50E-14 | ||
| SMART | 328 | 356 | 29 | 8.00E-04 | ||
| CDD | 329 | 389 | 61 | 6.50E-17 | ||
| ProSitePatterns | 337 | 349 | 13 | – | ||
| ProSiteProfiles | 360 | 394 | 35 | 12.589 | ||
| SMART | 363 | 391 | 29 | 9.60E-07 | ||
| ProSitePatterns | 372 | 384 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj5g3v0254340.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v0254340.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.