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| Field | Value |
|---|---|
| Gene ID | Lj5g3v0255520 |
| Transcript ID | Lj5g3v0255520.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Nitrate and chloride transporter [Medicago truncatula] gi|358346702|ref|XP_003637404.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 608 | 608 | 0 | – | |
| PANTHER | 1 | 608 | 608 | 0 | – | |
| Phobius | 1 | 24 | 24 | – | – | |
| SUPERFAMILY | 24 | 216 | 193 | 2.44E-18 | ||
| Pfam | 24 | 274 | 251 | 1.20E-87 | ||
| TMHMM | 25 | 47 | 23 | – | – | |
| Phobius | 25 | 47 | 23 | – | – | |
| Phobius | 48 | 88 | 41 | – | – | |
| TMHMM | 88 | 110 | 23 | – | – | |
| Phobius | 89 | 110 | 22 | – | – | |
| Phobius | 111 | 153 | 43 | – | – | |
| TMHMM | 153 | 175 | 23 | – | – | |
| Phobius | 154 | 177 | 24 | – | – | |
| Phobius | 178 | 188 | 11 | – | – | |
| Phobius | 189 | 212 | 24 | – | – | |
| TMHMM | 190 | 209 | 20 | – | – | |
| Phobius | 213 | 223 | 11 | – | – | |
| TMHMM | 221 | 243 | 23 | – | – | |
| Phobius | 224 | 243 | 20 | – | – | |
| Phobius | 244 | 254 | 11 | – | – | |
| TMHMM | 253 | 275 | 23 | – | – | |
| Phobius | 255 | 275 | 21 | – | – | |
| Phobius | 276 | 358 | 83 | – | – | |
| SUPERFAMILY | 345 | 572 | 228 | 2.44E-18 | ||
| Phobius | 359 | 382 | 24 | – | – | |
| TMHMM | 360 | 382 | 23 | – | – | |
| Gene3D | 363 | 569 | 207 | 3.40E-11 | – | |
| Phobius | 383 | 393 | 11 | – | – | |
| Phobius | 394 | 413 | 20 | – | – | |
| TMHMM | 397 | 419 | 23 | – | – | |
| Phobius | 414 | 433 | 20 | – | – | |
| TMHMM | 432 | 454 | 23 | – | – | |
| Phobius | 434 | 452 | 19 | – | – | |
| Phobius | 453 | 457 | 5 | – | – | |
| Phobius | 458 | 480 | 23 | – | – | |
| TMHMM | 458 | 480 | 23 | – | – | |
| Phobius | 481 | 491 | 11 | – | – | |
| Phobius | 492 | 516 | 25 | – | – | |
| TMHMM | 492 | 514 | 23 | – | – | |
| Phobius | 517 | 546 | 30 | – | – | |
| Phobius | 547 | 571 | 25 | – | – | |
| TMHMM | 549 | 571 | 23 | – | – | |
| Phobius | 572 | 610 | 39 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of Lj5g3v0255520.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v0255520.1, powered by CORGI.
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