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| Field | Value |
|---|---|
| Gene ID | Lj5g3v0310180 |
| Transcript ID | Lj5g3v0310180.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: tetratricopeptide repeat protein 7B-like isoform X1 [Cicer arietinum] gi|502125613|ref|XP_004498994.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 15 | 41 | 27 | – | – | |
| PANTHER | 33 | 711 | 679 | 0 | – | |
| PANTHER | 33 | 711 | 679 | 0 | – | |
| Gene3D | 45 | 148 | 104 | 7.70E-05 | ||
| SUPERFAMILY | 49 | 103 | 55 | 1.98E-09 | ||
| Pfam | 50 | 91 | 42 | 0.016 | – | |
| Coils | 58 | 78 | 21 | – | – | |
| SUPERFAMILY | 137 | 159 | 23 | 1.98E-09 | ||
| Gene3D | 149 | 235 | 87 | 2.90E-08 | ||
| SUPERFAMILY | 189 | 197 | 9 | 1.98E-09 | ||
| Gene3D | 307 | 352 | 46 | 2.70E-24 | ||
| SMART | 321 | 354 | 34 | 43 | ||
| SUPERFAMILY | 321 | 357 | 37 | 1.98E-09 | ||
| ProSiteProfiles | 321 | 354 | 34 | 6.018 | ||
| SUPERFAMILY | 427 | 466 | 40 | 1.98E-09 | ||
| Gene3D | 477 | 711 | 235 | 2.70E-24 | ||
| SMART | 515 | 548 | 34 | 210 | ||
| SUPERFAMILY | 572 | 708 | 137 | 3.80E-14 | ||
| ProSiteProfiles | 577 | 714 | 138 | 16.233 | ||
| SMART | 611 | 644 | 34 | 76 | ||
| ProSiteProfiles | 611 | 644 | 34 | 8.349 | ||
| SMART | 681 | 714 | 34 | 27 | ||
| ProSiteProfiles | 681 | 714 | 34 | 6.874 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj5g3v0310180.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v0310180.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.