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| Field | Value |
|---|---|
| Gene ID | Lj5g3v0369990 |
| Transcript ID | Lj5g3v0369990.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | MscS family inner membrane protein ynaI [Medicago truncatula] gi|357465255|ref|XP_003602909.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 108 | 108 | – | – | |
| PANTHER | 2 | 536 | 535 | 0 | – | |
| PANTHER | 2 | 536 | 535 | 0 | – | |
| TMHMM | 109 | 131 | 23 | – | – | |
| Phobius | 109 | 131 | 23 | – | – | |
| Phobius | 132 | 159 | 28 | – | – | |
| Phobius | 160 | 182 | 23 | – | – | |
| Phobius | 183 | 193 | 11 | – | – | |
| Phobius | 194 | 218 | 25 | – | – | |
| Phobius | 219 | 237 | 19 | – | – | |
| Phobius | 238 | 259 | 22 | – | – | |
| Pfam | 241 | 448 | 208 | 5.60E-29 | ||
| Phobius | 260 | 265 | 6 | – | – | |
| Phobius | 266 | 285 | 20 | – | – | |
| SUPERFAMILY | 284 | 354 | 71 | 6.54E-08 | ||
| Phobius | 286 | 701 | 416 | – | – | |
| Gene3D | 299 | 352 | 54 | 2.20E-06 | – | |
| MobiDBLite | 500 | 519 | 20 | – | – | |
| MobiDBLite | 527 | 701 | 175 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj5g3v0369990.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v0369990.1, powered by CORGI.
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