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PF00924

Source: Pfam

Description

Mechanosensitive ion channel

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016020
Cellular component Membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
Subterm of
GO:0055085
Biological process Transmembrane transport The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other.
Subterm of

Associated Lotus transcripts 20

Transcript Name Description Predicted domains Domain count
Lj0g3v0164009.1
– PREDICTED: mechanosensitive ion channel protein 10-like [Cicer arietinum] gi|502165208|ref|XP_004513470.1|
Domains
7
Lj1g3v1560060.1
– MscS family inner membrane protein ynaI [Medicago truncatula] gi|357465255|ref|XP_003602909.1|
Domains
11
Lj1g3v1788130.1
– PREDICTED: mechanosensitive ion channel protein 10-like [Cicer arietinum] gi|502132592|ref|XP_004501436.1|
Domains
11
Lj1g3v4590890.1
– PREDICTED: mechanosensitive ion channel protein 10-like [Cicer arietinum] gi|502165208|ref|XP_004513470.1|
Domains
14
Lj2g3v1454960.1
– MscS-Like mechanosensitive ion channel MSCL8 [Medicago truncatula] gi|357485521|ref|XP_003613048.1|
Domains
12
Lj4g3v2001930.1
– PREDICTED: mechanosensitive ion channel protein 1, mitochondrial-like [Cicer arietinum] gi|502157089|ref|XP_004510754.1|
Domains
14
Lj4g3v2001930.2
– PREDICTED: mechanosensitive ion channel protein 1, mitochondrial-like [Cicer arietinum] gi|502157089|ref|XP_004510754.1|
Domains
11
Lj5g3v0369990.1
– MscS family inner membrane protein ynaI [Medicago truncatula] gi|357465255|ref|XP_003602909.1|
Domains
12
Lj5g3v0370010.1
– PREDICTED: mechanosensitive ion channel protein 3, chloroplastic-like isoform X1 [Cicer arietinum] gi|502133071|ref|XP_004501641.1|
Domains
11
Lj5g3v2258330.1
– PREDICTED: mechanosensitive ion channel protein 6-like isoform X1 [Cicer arietinum] gi|502121167|ref|XP_004497211.1|
Domains
15
Lj6g3v1201410.1
– PREDICTED: mechanosensitive ion channel protein 10-like [Cicer arietinum] gi|502165208|ref|XP_004513470.1|
Domains
14
LotjaGi1g1v0346900.1
– Mechanosensitive ion channel-like protein; TAIR: AT1G58200.1 MSCS-like 3; Swiss-Prot: sp|Q8L7W1|MSL3_ARATH Mechanosensitive ion channel protein 3, chloroplastic; TrEMBL-Plants: tr|A0A151TSP1|A0A151TSP1_CAJCA MscS family inner membrane protein ynaI; Found in the gene: LotjaGi1g1v0346900
Domains
11
LotjaGi1g1v0346900.2
– Mechanosensitive ion channel-like protein; TAIR: AT5G10490.1 MSCS-like 2; Swiss-Prot: sp|Q56X46|MSL2_ARATH Mechanosensitive ion channel protein 2, chloroplastic; TrEMBL-Plants: tr|G7J535|G7J535_MEDTR Mechanosensitive ion channel-like protein; Found in the gene: LotjaGi1g1v0346900
Domains
10
LotjaGi1g1v0347100.1
– Mechanosensitive ion channel-like protein; TAIR: AT1G58200.1 MSCS-like 3; Swiss-Prot: sp|Q8L7W1|MSL3_ARATH Mechanosensitive ion channel protein 3, chloroplastic; TrEMBL-Plants: tr|G7J539|G7J539_MEDTR Mechanosensitive ion channel-like protein; Found in the gene: LotjaGi1g1v0347100
Domains
10
LotjaGi1g1v0370600.1
– Mechanosensitive ion channel family protein; TAIR: AT5G12080.1 mechanosensitive channel of small conductance-like 10; Swiss-Prot: sp|Q9LYG9|MSL10_ARATH Mechanosensitive ion channel protein 10; TrEMBL-Plants: tr|K7KTA0|K7KTA0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0370600
Domains
15
LotjaGi2g1v0327300.1
– Mechanosensitive ion channel-like protein; TAIR: AT5G10490.1 MSCS-like 2; Swiss-Prot: sp|Q56X46|MSL2_ARATH Mechanosensitive ion channel protein 2, chloroplastic; TrEMBL-Plants: tr|A0A0B2Q3B9|A0A0B2Q3B9_GLYSO Mechanosensitive ion channel protein 2, chloroplastic; Found in the gene: LotjaGi2g1v0327300
Domains
11
LotjaGi3g1v0386200.1
– Mechanosensitive ion channel protein; TAIR: AT4G00290.1 Mechanosensitive ion channel protein; Swiss-Prot: sp|Q8VZL4|MSL1_ARATH Mechanosensitive ion channel protein 1, mitochondrial; TrEMBL-Plants: tr|A0A0S3SYM0|A0A0S3SYM0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0386200
Domains
15
LotjaGi3g1v0386200.2
– Mechanosensitive ion channel protein; TAIR: AT4G00290.1 Mechanosensitive ion channel protein; Swiss-Prot: sp|Q8VZL4|MSL1_ARATH Mechanosensitive ion channel protein 1, mitochondrial; TrEMBL-Plants: tr|A0A0S3SYM0|A0A0S3SYM0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0386200
Domains
11
LotjaGi5g1v0351500.1
– Mechanosensitive ion channel family protein; TAIR: AT1G78610.1 mechanosensitive channel of small conductance-like 6; Swiss-Prot: sp|Q9SYM1|MSL6_ARATH Mechanosensitive ion channel protein 6; TrEMBL-Plants: tr|I1NF72|I1NF72_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0351500
Domains
16
LotjaGi6g1v0226700.1
– Mechanosensitive ion channel family protein; TAIR: AT5G12080.1 mechanosensitive channel of small conductance-like 10; Swiss-Prot: sp|Q9LYG9|MSL10_ARATH Mechanosensitive ion channel protein 10; TrEMBL-Plants: tr|A0A0B2RXT1|A0A0B2RXT1_GLYSO Mechanosensitive ion channel protein 10; Found in the gene: LotjaGi6g1v0226700
Domains
15

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 5.00