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| Field | Value |
|---|---|
| Gene ID | Lj5g3v0370010 |
| Transcript ID | Lj5g3v0370010.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: mechanosensitive ion channel protein 3, chloroplastic-like isoform X1 [Cicer arietinum] gi|502133071|ref|XP_004501641.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 107 | 107 | – | – | |
| PANTHER | 2 | 492 | 491 | 0 | – | |
| PANTHER | 2 | 492 | 491 | 0 | – | |
| TMHMM | 108 | 130 | 23 | – | – | |
| Phobius | 108 | 130 | 23 | – | – | |
| Phobius | 131 | 150 | 20 | – | – | |
| TMHMM | 149 | 171 | 23 | – | – | |
| Phobius | 151 | 171 | 21 | – | – | |
| Phobius | 172 | 190 | 19 | – | – | |
| TMHMM | 191 | 213 | 23 | – | – | |
| Phobius | 191 | 208 | 18 | – | – | |
| Phobius | 209 | 239 | 31 | – | – | |
| Pfam | 239 | 448 | 210 | 4.50E-28 | ||
| Phobius | 240 | 258 | 19 | – | – | |
| TMHMM | 240 | 262 | 23 | – | – | |
| Phobius | 259 | 263 | 5 | – | – | |
| Phobius | 264 | 283 | 20 | – | – | |
| SUPERFAMILY | 282 | 351 | 70 | 1.11E-06 | ||
| Phobius | 284 | 494 | 211 | – | – | |
| Gene3D | 297 | 350 | 54 | 8.80E-05 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj5g3v0370010.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v0370010.1, powered by CORGI.
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