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| Field | Value |
|---|---|
| Gene ID | Lj5g3v0510790 |
| Transcript ID | Lj5g3v0510790.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable folate-biopterin transporter 6-like isoform X1 [Cicer arietinum] gi|502125097|ref|XP_004498796.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 40 | 40 | – | – | |
| PANTHER | 1 | 495 | 495 | 0 | – | |
| PANTHER | 1 | 495 | 495 | 0 | – | |
| TIGRFAM | 26 | 457 | 432 | 8.80E-65 | ||
| TMHMM | 41 | 63 | 23 | – | – | |
| Phobius | 41 | 60 | 20 | – | – | |
| Gene3D | 45 | 238 | 194 | 1.30E-07 | – | |
| SUPERFAMILY | 46 | 443 | 398 | 9.16E-22 | ||
| Pfam | 53 | 230 | 178 | 4.90E-39 | ||
| Phobius | 61 | 79 | 19 | – | – | |
| CDD | 74 | 412 | 339 | 5.09E-04 | ||
| TMHMM | 78 | 100 | 23 | – | – | |
| Phobius | 80 | 100 | 21 | – | – | |
| Phobius | 101 | 111 | 11 | – | – | |
| Phobius | 112 | 131 | 20 | – | – | |
| TMHMM | 112 | 131 | 20 | – | – | |
| Phobius | 132 | 136 | 5 | – | – | |
| TMHMM | 135 | 157 | 23 | – | – | |
| Phobius | 137 | 157 | 21 | – | – | |
| Phobius | 158 | 177 | 20 | – | – | |
| TMHMM | 178 | 197 | 20 | – | – | |
| Phobius | 178 | 201 | 24 | – | – | |
| Phobius | 202 | 206 | 5 | – | – | |
| TMHMM | 207 | 224 | 18 | – | – | |
| Phobius | 207 | 225 | 19 | – | – | |
| Phobius | 226 | 259 | 34 | – | – | |
| Phobius | 260 | 278 | 19 | – | – | |
| TMHMM | 261 | 283 | 23 | – | – | |
| Pfam | 272 | 460 | 189 | 2.90E-47 | ||
| Phobius | 279 | 297 | 19 | – | – | |
| Phobius | 298 | 317 | 20 | – | – | |
| TMHMM | 298 | 317 | 20 | – | – | |
| Phobius | 318 | 328 | 11 | – | – | |
| Phobius | 329 | 351 | 23 | – | – | |
| TMHMM | 329 | 351 | 23 | – | – | |
| Phobius | 352 | 432 | 81 | – | – | |
| Phobius | 433 | 454 | 22 | – | – | |
| Phobius | 455 | 495 | 41 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of Lj5g3v0510790.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v0510790.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.