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| Field | Value |
|---|---|
| Gene ID | Lj5g3v0510940 |
| Transcript ID | Lj5g3v0510940.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable folate-biopterin transporter 2-like isoform X2 [Cicer arietinum] gi|502125088|ref|XP_004498793.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 45 | 45 | – | – | |
| PANTHER | 2 | 497 | 496 | 0 | – | |
| PANTHER | 2 | 497 | 496 | 0 | – | |
| TIGRFAM | 44 | 464 | 421 | 6.20E-67 | ||
| Phobius | 46 | 70 | 25 | – | – | |
| TMHMM | 48 | 70 | 23 | – | – | |
| SUPERFAMILY | 49 | 459 | 411 | 9.29E-26 | ||
| Gene3D | 50 | 235 | 186 | 3.20E-16 | – | |
| Pfam | 60 | 232 | 173 | 1.70E-39 | ||
| Phobius | 71 | 119 | 49 | – | – | |
| TMHMM | 120 | 137 | 18 | – | – | |
| Phobius | 120 | 137 | 18 | – | – | |
| Phobius | 138 | 142 | 5 | – | – | |
| TMHMM | 142 | 164 | 23 | – | – | |
| Phobius | 143 | 164 | 22 | – | – | |
| Phobius | 165 | 184 | 20 | – | – | |
| Phobius | 185 | 208 | 24 | – | – | |
| TMHMM | 185 | 207 | 23 | – | – | |
| Phobius | 209 | 213 | 5 | – | – | |
| TMHMM | 212 | 231 | 20 | – | – | |
| Phobius | 214 | 232 | 19 | – | – | |
| Phobius | 233 | 268 | 36 | – | – | |
| Gene3D | 268 | 434 | 167 | 7.60E-07 | – | |
| TMHMM | 269 | 288 | 20 | – | – | |
| Pfam | 269 | 461 | 193 | 3.70E-54 | ||
| Phobius | 269 | 290 | 22 | – | – | |
| Phobius | 291 | 301 | 11 | – | – | |
| Phobius | 302 | 321 | 20 | – | – | |
| TMHMM | 303 | 320 | 18 | – | – | |
| Phobius | 322 | 332 | 11 | – | – | |
| Phobius | 333 | 355 | 23 | – | – | |
| TMHMM | 333 | 355 | 23 | – | – | |
| Phobius | 356 | 360 | 5 | – | – | |
| Phobius | 361 | 380 | 20 | – | – | |
| Phobius | 381 | 400 | 20 | – | – | |
| Phobius | 401 | 425 | 25 | – | – | |
| TMHMM | 402 | 424 | 23 | – | – | |
| Phobius | 426 | 436 | 11 | – | – | |
| Phobius | 437 | 458 | 22 | – | – | |
| TMHMM | 437 | 459 | 23 | – | – | |
| Phobius | 459 | 499 | 41 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of Lj5g3v0510940.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v0510940.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.